4.0.0 net.maizegenetics tassel jar 5.2.76 ${project.groupId}:${project.artifactId} TASSEL is a software package to evaluate traits associations, evolutionary patterns, and linkage disequilibrium. http://www.maizegenetics.net/tassel GNU Lesser General Public License, version 2.1 https://www.gnu.org/licenses/lgpl-2.1.html scm:git:git://bitbucket.org:tasseladmin/tassel-5-source.git scm:git:ssh://bitbucket.org:tasseladmin/tassel-5-source.git https://bitbucket.org/tasseladmin/tassel-5-source/src ossrh https://oss.sonatype.org/content/repositories/snapshots ossrh https://oss.sonatype.org/service/local/staging/deploy/maven2/ Terry Casstevens tmc46@cornell.edu Buckler Lab http://www.maizegenetics.net/ Ed Buckler esb33@cornell.edu Buckler Lab http://www.maizegenetics.net/ Lynn Johnson lcj34@cornell.edu Buckler Lab http://www.maizegenetics.net/ Zack Miller zrm22@cornell.edu Buckler Lab http://www.maizegenetics.net/ Peter Bradbury pjb39@cornell.edu Buckler Lab http://www.maizegenetics.net/ yyyy-MM-dd 1.4.32 0.10.0 jcenter JCenter https://jcenter.bintray.com/ ${project.basedir}/dist ${project.basedir}/build sTASSEL src ${project.basedir}/../tassel-5-test/src ${project.basedir}/src **/*.gif **/*.GIF **/*.png **/*.html **/*.sql **/*.xml org.jetbrains.kotlin kotlin-maven-plugin ${kotlin.version} compile compile compile ${project.basedir}/src/test/kotlin ${project.basedir}/src/test/java test-compile test-compile test-compile 1.8 ${project.basedir}/src org.apache.maven.plugins maven-compiler-plugin 3.5.1 default-compile none default-testCompile none java-compile compile compile java-test-compile test-compile testCompile 1.8 1.8 org.apache.maven.plugins maven-jar-plugin true lib/ net.maizegenetics.tassel.TASSELMainApp lib/phg.jar org.apache.maven.plugins maven-surefire-plugin 2.19.1 -Xmx10g true ${project.basedir}/../tassel-5-test/ **/analysis/gobii/*Test.java **/analysis/gbs/*Test.java **/analysis/gbs/v2/*Test.java **/analysis/gbs/repgen/*Test.java **/analysis/monetdb/*Test.java **/LowLevelCopyOfHDF5Test.java **/SplitHDF5ByChromosomePluginTest.java **/ThinSitesByPositionPluginTest.java **/LDKNNiImputationPluginTest.java **/GenomeFeatureBuilderTest.java **/BasicGenotypeMergeRuleTest.java **/DistanceMatrixHDF5Test.java **/TagsOnPhysMapHDF5Test.java **/FastMultithreadedAssociationPluginTest.java **/BuildUnfinishedHDF5GenotypesPluginTest.java **/GenomeAnnosDBQueryToPositionListPluginTest.java **/analysis/rna/*Test.java org.apache.maven.plugins maven-source-plugin 2.2.1 attach-source jar-no-fork org.jetbrains.dokka dokka-maven-plugin ${dokka.version} prepare-package dokka javadoc javadocJar packages.md org.apache.maven.plugins maven-gpg-plugin 1.5 sign-artifacts verify sign org.sonatype.plugins nexus-staging-maven-plugin 1.6.8 true ossrh https://oss.sonatype.org/ false maven-clean-plugin 3.0.0 ${project.basedir}/../tassel-5-test/tempDir org.apache.maven.plugins maven-antrun-plugin 1.4 generate-test-resources run org.apache.maven.plugins maven-assembly-plugin 3.1.0 jar-with-dependencies make-assembly package single scijava.public https://maven.scijava.org/content/groups/public imagej.public http://maven.imagej.net/content/groups/public log4j log4j 1.2.13 com.google.guava guava 22.0 org.apache.commons commons-math3 3.4.1 commons-codec commons-codec 1.10 org.biojava biojava-core 4.0.0 org.biojava biojava-alignment 4.0.0 org.biojava biojava-phylo 4.0.0 org.jfree jfreechart 1.0.19 org.jfree jfreesvg 3.2 net.sf.trove4j trove4j 3.0.3 org.ejml ejml-ddense 0.41 org.xerial.snappy snappy-java 1.1.1.6 javax.mail mail 1.4 com.googlecode.json-simple json-simple 1.1.1 org.glassfish javax.json 1.0.4 org.xerial sqlite-jdbc 3.8.5-pre1 com.github.samtools htsjdk 2.23.0 org.ahocorasick ahocorasick 0.2.4 org.postgresql postgresql 9.4-1201-jdbc41 org.apache.avro avro 1.8.1 colt colt 1.2.0 org.biojava.thirdparty forester 1.038 cisd jhdf5 14.12.5 jar org.jetbrains.kotlin kotlin-stdlib-jdk8 ${kotlin.version} org.jetbrains.kotlin kotlin-test ${kotlin.version} test org.ini4j ini4j 0.5.4 it.unimi.dsi fastutil 8.2.2