AmazonOmicsClient (AWS Java SDK for Amazon Omics 1.12.783 API)

java.lang.Object
- com.amazonaws.AmazonWebServiceClient
- - com.amazonaws.services.omics.AmazonOmicsClient

All Implemented Interfaces:

AmazonOmics

Direct Known Subclasses:

AmazonOmicsAsyncClient
```
@ThreadSafe
 @Generated(value="com.amazonaws:aws-java-sdk-code-generator")
public class AmazonOmicsClient
extends AmazonWebServiceClient
implements AmazonOmics
```
Client for accessing Amazon Omics. All service calls made using this client are blocking, and will not return until the service call completes.

This is the AWS HealthOmics API Reference. For an introduction to the service, see What is AWS HealthOmics? in the AWS HealthOmics User Guide.

Field Summary

Fields
Modifier and Type Field and Description

protected static ClientConfigurationFactory configFactory
Client configuration factory providing ClientConfigurations tailored to this client
- Fields inherited from class com.amazonaws.AmazonWebServiceClient
  client, clientConfiguration, endpoint, isEndpointOverridden, LOGGING_AWS_REQUEST_METRIC, requestHandler2s, timeOffset
- Fields inherited from interface com.amazonaws.services.omics.AmazonOmics
  ENDPOINT_PREFIX

Fields
Modifier and Type	Field and Description
`protected static ClientConfigurationFactory`	`configFactory` Client configuration factory providing ClientConfigurations tailored to this client

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`AbortMultipartReadSetUploadResult`	`abortMultipartReadSetUpload(AbortMultipartReadSetUploadRequest request)` Stops a multipart upload.
`AcceptShareResult`	`acceptShare(AcceptShareRequest request)` Accept a resource share request.
`BatchDeleteReadSetResult`	`batchDeleteReadSet(BatchDeleteReadSetRequest request)` Deletes one or more read sets.
`static AmazonOmicsClientBuilder`	`builder()`
`CancelAnnotationImportJobResult`	`cancelAnnotationImportJob(CancelAnnotationImportJobRequest request)` Cancels an annotation import job.
`CancelRunResult`	`cancelRun(CancelRunRequest request)` Cancels a run.
`CancelVariantImportJobResult`	`cancelVariantImportJob(CancelVariantImportJobRequest request)` Cancels a variant import job.
`CompleteMultipartReadSetUploadResult`	`completeMultipartReadSetUpload(CompleteMultipartReadSetUploadRequest request)` Concludes a multipart upload once you have uploaded all the components.
`CreateAnnotationStoreResult`	`createAnnotationStore(CreateAnnotationStoreRequest request)` Creates an annotation store.
`CreateAnnotationStoreVersionResult`	`createAnnotationStoreVersion(CreateAnnotationStoreVersionRequest request)` Creates a new version of an annotation store.
`CreateMultipartReadSetUploadResult`	`createMultipartReadSetUpload(CreateMultipartReadSetUploadRequest request)` Begins a multipart read set upload.
`CreateReferenceStoreResult`	`createReferenceStore(CreateReferenceStoreRequest request)` Creates a reference store.
`CreateRunGroupResult`	`createRunGroup(CreateRunGroupRequest request)` Creates a run group.
`CreateSequenceStoreResult`	`createSequenceStore(CreateSequenceStoreRequest request)` Creates a sequence store.
`CreateShareResult`	`createShare(CreateShareRequest request)` Creates a cross-account shared resource.
`CreateVariantStoreResult`	`createVariantStore(CreateVariantStoreRequest request)` Creates a variant store.
`CreateWorkflowResult`	`createWorkflow(CreateWorkflowRequest request)` Creates a workflow.
`DeleteAnnotationStoreResult`	`deleteAnnotationStore(DeleteAnnotationStoreRequest request)` Deletes an annotation store.
`DeleteAnnotationStoreVersionsResult`	`deleteAnnotationStoreVersions(DeleteAnnotationStoreVersionsRequest request)` Deletes one or multiple versions of an annotation store.
`DeleteReferenceResult`	`deleteReference(DeleteReferenceRequest request)` Deletes a genome reference.
`DeleteReferenceStoreResult`	`deleteReferenceStore(DeleteReferenceStoreRequest request)` Deletes a genome reference store.
`DeleteRunResult`	`deleteRun(DeleteRunRequest request)` Deletes a workflow run.
`DeleteRunGroupResult`	`deleteRunGroup(DeleteRunGroupRequest request)` Deletes a workflow run group.
`DeleteSequenceStoreResult`	`deleteSequenceStore(DeleteSequenceStoreRequest request)` Deletes a sequence store.
`DeleteShareResult`	`deleteShare(DeleteShareRequest request)` Deletes a resource share.
`DeleteVariantStoreResult`	`deleteVariantStore(DeleteVariantStoreRequest request)` Deletes a variant store.
`DeleteWorkflowResult`	`deleteWorkflow(DeleteWorkflowRequest request)` Deletes a workflow.
`GetAnnotationImportJobResult`	`getAnnotationImportJob(GetAnnotationImportJobRequest request)` Gets information about an annotation import job.
`GetAnnotationStoreResult`	`getAnnotationStore(GetAnnotationStoreRequest request)` Gets information about an annotation store.
`GetAnnotationStoreVersionResult`	`getAnnotationStoreVersion(GetAnnotationStoreVersionRequest request)` Retrieves the metadata for an annotation store version.
`ResponseMetadata`	`getCachedResponseMetadata(AmazonWebServiceRequest request)` Returns additional metadata for a previously executed successful, request, typically used for debugging issues where a service isn't acting as expected.
`GetReadSetResult`	`getReadSet(GetReadSetRequest request)` Gets a file from a read set.
`GetReadSetActivationJobResult`	`getReadSetActivationJob(GetReadSetActivationJobRequest request)` Gets information about a read set activation job.
`GetReadSetExportJobResult`	`getReadSetExportJob(GetReadSetExportJobRequest request)` Gets information about a read set export job.
`GetReadSetImportJobResult`	`getReadSetImportJob(GetReadSetImportJobRequest request)` Gets information about a read set import job.
`GetReadSetMetadataResult`	`getReadSetMetadata(GetReadSetMetadataRequest request)` Gets details about a read set.
`GetReferenceResult`	`getReference(GetReferenceRequest request)` Gets a reference file.
`GetReferenceImportJobResult`	`getReferenceImportJob(GetReferenceImportJobRequest request)` Gets information about a reference import job.
`GetReferenceMetadataResult`	`getReferenceMetadata(GetReferenceMetadataRequest request)` Gets information about a genome reference's metadata.
`GetReferenceStoreResult`	`getReferenceStore(GetReferenceStoreRequest request)` Gets information about a reference store.
`GetRunResult`	`getRun(GetRunRequest request)` Gets information about a workflow run.
`GetRunGroupResult`	`getRunGroup(GetRunGroupRequest request)` Gets information about a workflow run group.
`GetRunTaskResult`	`getRunTask(GetRunTaskRequest request)` Gets information about a workflow run task.
`GetSequenceStoreResult`	`getSequenceStore(GetSequenceStoreRequest request)` Gets information about a sequence store.
`GetShareResult`	`getShare(GetShareRequest request)` Retrieves the metadata for the specified resource share.
`GetVariantImportJobResult`	`getVariantImportJob(GetVariantImportJobRequest request)` Gets information about a variant import job.
`GetVariantStoreResult`	`getVariantStore(GetVariantStoreRequest request)` Gets information about a variant store.
`GetWorkflowResult`	`getWorkflow(GetWorkflowRequest request)` Gets information about a workflow.
`ListAnnotationImportJobsResult`	`listAnnotationImportJobs(ListAnnotationImportJobsRequest request)` Retrieves a list of annotation import jobs.
`ListAnnotationStoresResult`	`listAnnotationStores(ListAnnotationStoresRequest request)` Retrieves a list of annotation stores.
`ListAnnotationStoreVersionsResult`	`listAnnotationStoreVersions(ListAnnotationStoreVersionsRequest request)` Lists the versions of an annotation store.
`ListMultipartReadSetUploadsResult`	`listMultipartReadSetUploads(ListMultipartReadSetUploadsRequest request)` Lists multipart read set uploads and for in progress uploads.
`ListReadSetActivationJobsResult`	`listReadSetActivationJobs(ListReadSetActivationJobsRequest request)` Retrieves a list of read set activation jobs.
`ListReadSetExportJobsResult`	`listReadSetExportJobs(ListReadSetExportJobsRequest request)` Retrieves a list of read set export jobs.
`ListReadSetImportJobsResult`	`listReadSetImportJobs(ListReadSetImportJobsRequest request)` Retrieves a list of read set import jobs.
`ListReadSetsResult`	`listReadSets(ListReadSetsRequest request)` Retrieves a list of read sets.
`ListReadSetUploadPartsResult`	`listReadSetUploadParts(ListReadSetUploadPartsRequest request)` This operation will list all parts in a requested multipart upload for a sequence store.
`ListReferenceImportJobsResult`	`listReferenceImportJobs(ListReferenceImportJobsRequest request)` Retrieves a list of reference import jobs.
`ListReferencesResult`	`listReferences(ListReferencesRequest request)` Retrieves a list of references.
`ListReferenceStoresResult`	`listReferenceStores(ListReferenceStoresRequest request)` Retrieves a list of reference stores.
`ListRunGroupsResult`	`listRunGroups(ListRunGroupsRequest request)` Retrieves a list of run groups.
`ListRunsResult`	`listRuns(ListRunsRequest request)` Retrieves a list of runs.
`ListRunTasksResult`	`listRunTasks(ListRunTasksRequest request)` Retrieves a list of tasks for a run.
`ListSequenceStoresResult`	`listSequenceStores(ListSequenceStoresRequest request)` Retrieves a list of sequence stores.
`ListSharesResult`	`listShares(ListSharesRequest request)` Retrieves the resource shares associated with an account.
`ListTagsForResourceResult`	`listTagsForResource(ListTagsForResourceRequest request)` Retrieves a list of tags for a resource.
`ListVariantImportJobsResult`	`listVariantImportJobs(ListVariantImportJobsRequest request)` Retrieves a list of variant import jobs.
`ListVariantStoresResult`	`listVariantStores(ListVariantStoresRequest request)` Retrieves a list of variant stores.
`ListWorkflowsResult`	`listWorkflows(ListWorkflowsRequest request)` Retrieves a list of workflows.
`void`	`shutdown()` Shuts down this client object, releasing any resources that might be held open.
`StartAnnotationImportJobResult`	`startAnnotationImportJob(StartAnnotationImportJobRequest request)` Starts an annotation import job.
`StartReadSetActivationJobResult`	`startReadSetActivationJob(StartReadSetActivationJobRequest request)` Activates an archived read set.
`StartReadSetExportJobResult`	`startReadSetExportJob(StartReadSetExportJobRequest request)` Exports a read set to Amazon S3.
`StartReadSetImportJobResult`	`startReadSetImportJob(StartReadSetImportJobRequest request)` Starts a read set import job.
`StartReferenceImportJobResult`	`startReferenceImportJob(StartReferenceImportJobRequest request)` Starts a reference import job.
`StartRunResult`	`startRun(StartRunRequest request)` Starts a workflow run.
`StartVariantImportJobResult`	`startVariantImportJob(StartVariantImportJobRequest request)` Starts a variant import job.
`TagResourceResult`	`tagResource(TagResourceRequest request)` Tags a resource.
`UntagResourceResult`	`untagResource(UntagResourceRequest request)` Removes tags from a resource.
`UpdateAnnotationStoreResult`	`updateAnnotationStore(UpdateAnnotationStoreRequest request)` Updates an annotation store.
`UpdateAnnotationStoreVersionResult`	`updateAnnotationStoreVersion(UpdateAnnotationStoreVersionRequest request)` Updates the description of an annotation store version.
`UpdateRunGroupResult`	`updateRunGroup(UpdateRunGroupRequest request)` Updates a run group.
`UpdateVariantStoreResult`	`updateVariantStore(UpdateVariantStoreRequest request)` Updates a variant store.
`UpdateWorkflowResult`	`updateWorkflow(UpdateWorkflowRequest request)` Updates a workflow.
`UploadReadSetPartResult`	`uploadReadSetPart(UploadReadSetPartRequest request)` This operation uploads a specific part of a read set.
`AmazonOmicsWaiters`	`waiters()`

Methods inherited from class com.amazonaws.AmazonWebServiceClient
addRequestHandler, addRequestHandler, beforeClientExecution, beforeMarshalling, calculateCRC32FromCompressedData, checkMutability, configureRegion, createExecutionContext, createExecutionContext, createExecutionContext, createSignerProvider, endClientExecution, endClientExecution, getClientConfiguration, getClientId, getEndpointPrefix, getMonitoringListeners, getRequestMetricsCollector, getServiceAbbreviation, getServiceName, getServiceNameIntern, getSigner, getSignerByURI, getSignerOverride, getSignerProvider, getSignerRegionOverride, getSigningRegion, getTimeOffset, isCsmEnabled, isEndpointOverridden, isProfilingEnabled, isRequestMetricsEnabled, makeImmutable, removeRequestHandler, removeRequestHandler, requestMetricCollector, setEndpoint, setEndpoint, setEndpointPrefix, setRegion, setServiceNameIntern, setSignerRegionOverride, setTimeOffset, shouldGenerateClientSideMonitoringEvents, useStrictHostNameVerification, withEndpoint, withRegion, withRegion, withTimeOffset

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Field Detail
  - configFactory
```
protected static final ClientConfigurationFactory configFactory
```
    Client configuration factory providing ClientConfigurations tailored to this client
- Method Detail
  - builder
```
public static AmazonOmicsClientBuilder builder()
```
  - abortMultipartReadSetUpload
```
public AbortMultipartReadSetUploadResult abortMultipartReadSetUpload(AbortMultipartReadSetUploadRequest request)
```
    Stops a multipart upload.
    
    Specified by:
    
    abortMultipartReadSetUpload in interface AmazonOmics
    
    Parameters:
    
    abortMultipartReadSetUploadRequest -
    
    Returns:
    
    Result of the AbortMultipartReadSetUpload operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    NotSupportedOperationException - The operation is not supported by Amazon Omics, or the API does not exist.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - acceptShare
```
public AcceptShareResult acceptShare(AcceptShareRequest request)
```
    Accept a resource share request.
    
    Specified by:
    
    acceptShare in interface AmazonOmics
    
    Parameters:
    
    acceptShareRequest -
    
    Returns:
    
    Result of the AcceptShare operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - batchDeleteReadSet
```
public BatchDeleteReadSetResult batchDeleteReadSet(BatchDeleteReadSetRequest request)
```
    Deletes one or more read sets.
    
    Specified by:
    
    batchDeleteReadSet in interface AmazonOmics
    
    Parameters:
    
    batchDeleteReadSetRequest -
    
    Returns:
    
    Result of the BatchDeleteReadSet operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - cancelAnnotationImportJob
```
public CancelAnnotationImportJobResult cancelAnnotationImportJob(CancelAnnotationImportJobRequest request)
```
    Cancels an annotation import job.
    
    Specified by:
    
    cancelAnnotationImportJob in interface AmazonOmics
    
    Parameters:
    
    cancelAnnotationImportJobRequest -
    
    Returns:
    
    Result of the CancelAnnotationImportJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - cancelRun
```
public CancelRunResult cancelRun(CancelRunRequest request)
```
    Cancels a run.
    
    Specified by:
    
    cancelRun in interface AmazonOmics
    
    Parameters:
    
    cancelRunRequest -
    
    Returns:
    
    Result of the CancelRun operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - cancelVariantImportJob
```
public CancelVariantImportJobResult cancelVariantImportJob(CancelVariantImportJobRequest request)
```
    Cancels a variant import job.
    
    Specified by:
    
    cancelVariantImportJob in interface AmazonOmics
    
    Parameters:
    
    cancelVariantImportJobRequest -
    
    Returns:
    
    Result of the CancelVariantImportJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - completeMultipartReadSetUpload
```
public CompleteMultipartReadSetUploadResult completeMultipartReadSetUpload(CompleteMultipartReadSetUploadRequest request)
```
    Concludes a multipart upload once you have uploaded all the components.
    
    Specified by:
    
    completeMultipartReadSetUpload in interface AmazonOmics
    
    Parameters:
    
    completeMultipartReadSetUploadRequest -
    
    Returns:
    
    Result of the CompleteMultipartReadSetUpload operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    NotSupportedOperationException - The operation is not supported by Amazon Omics, or the API does not exist.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - createAnnotationStore
```
public CreateAnnotationStoreResult createAnnotationStore(CreateAnnotationStoreRequest request)
```
    Creates an annotation store.
    
    Specified by:
    
    createAnnotationStore in interface AmazonOmics
    
    Parameters:
    
    createAnnotationStoreRequest -
    
    Returns:
    
    Result of the CreateAnnotationStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - createAnnotationStoreVersion
```
public CreateAnnotationStoreVersionResult createAnnotationStoreVersion(CreateAnnotationStoreVersionRequest request)
```
    Creates a new version of an annotation store.
    
    Specified by:
    
    createAnnotationStoreVersion in interface AmazonOmics
    
    Parameters:
    
    createAnnotationStoreVersionRequest -
    
    Returns:
    
    Result of the CreateAnnotationStoreVersion operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - createMultipartReadSetUpload
```
public CreateMultipartReadSetUploadResult createMultipartReadSetUpload(CreateMultipartReadSetUploadRequest request)
```
    Begins a multipart read set upload.
    
    Specified by:
    
    createMultipartReadSetUpload in interface AmazonOmics
    
    Parameters:
    
    createMultipartReadSetUploadRequest -
    
    Returns:
    
    Result of the CreateMultipartReadSetUpload operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    NotSupportedOperationException - The operation is not supported by Amazon Omics, or the API does not exist.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - createReferenceStore
```
public CreateReferenceStoreResult createReferenceStore(CreateReferenceStoreRequest request)
```
    Creates a reference store.
    
    Specified by:
    
    createReferenceStore in interface AmazonOmics
    
    Parameters:
    
    createReferenceStoreRequest -
    
    Returns:
    
    Result of the CreateReferenceStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - createRunGroup
```
public CreateRunGroupResult createRunGroup(CreateRunGroupRequest request)
```
    Creates a run group.
    
    Specified by:
    
    createRunGroup in interface AmazonOmics
    
    Parameters:
    
    createRunGroupRequest -
    
    Returns:
    
    Result of the CreateRunGroup operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - createSequenceStore
```
public CreateSequenceStoreResult createSequenceStore(CreateSequenceStoreRequest request)
```
    Creates a sequence store.
    
    Specified by:
    
    createSequenceStore in interface AmazonOmics
    
    Parameters:
    
    createSequenceStoreRequest -
    
    Returns:
    
    Result of the CreateSequenceStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - createShare
```
public CreateShareResult createShare(CreateShareRequest request)
```
    Creates a cross-account shared resource. The resource owner makes an offer to share the resource with the principal subscriber (an AWS user with a different account than the resource owner).
    
    The following resources support cross-account sharing:
    - Healthomics variant stores
    - Healthomics annotation stores
    - Private workflows
    Specified by:
    
    createShare in interface AmazonOmics
    
    Parameters:
    
    createShareRequest -
    
    Returns:
    
    Result of the CreateShare operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - createVariantStore
```
public CreateVariantStoreResult createVariantStore(CreateVariantStoreRequest request)
```
    Creates a variant store.
    
    Specified by:
    
    createVariantStore in interface AmazonOmics
    
    Parameters:
    
    createVariantStoreRequest -
    
    Returns:
    
    Result of the CreateVariantStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - createWorkflow
```
public CreateWorkflowResult createWorkflow(CreateWorkflowRequest request)
```
    Creates a workflow.
    
    Specified by:
    
    createWorkflow in interface AmazonOmics
    
    Parameters:
    
    createWorkflowRequest -
    
    Returns:
    
    Result of the CreateWorkflow operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - deleteAnnotationStore
```
public DeleteAnnotationStoreResult deleteAnnotationStore(DeleteAnnotationStoreRequest request)
```
    Deletes an annotation store.
    
    Specified by:
    
    deleteAnnotationStore in interface AmazonOmics
    
    Parameters:
    
    deleteAnnotationStoreRequest -
    
    Returns:
    
    Result of the DeleteAnnotationStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - deleteAnnotationStoreVersions
```
public DeleteAnnotationStoreVersionsResult deleteAnnotationStoreVersions(DeleteAnnotationStoreVersionsRequest request)
```
    Deletes one or multiple versions of an annotation store.
    
    Specified by:
    
    deleteAnnotationStoreVersions in interface AmazonOmics
    
    Parameters:
    
    deleteAnnotationStoreVersionsRequest -
    
    Returns:
    
    Result of the DeleteAnnotationStoreVersions operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - deleteReference
```
public DeleteReferenceResult deleteReference(DeleteReferenceRequest request)
```
    Deletes a genome reference.
    
    Specified by:
    
    deleteReference in interface AmazonOmics
    
    Parameters:
    
    deleteReferenceRequest -
    
    Returns:
    
    Result of the DeleteReference operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - deleteReferenceStore
```
public DeleteReferenceStoreResult deleteReferenceStore(DeleteReferenceStoreRequest request)
```
    Deletes a genome reference store.
    
    Specified by:
    
    deleteReferenceStore in interface AmazonOmics
    
    Parameters:
    
    deleteReferenceStoreRequest -
    
    Returns:
    
    Result of the DeleteReferenceStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - deleteRun
```
public DeleteRunResult deleteRun(DeleteRunRequest request)
```
    Deletes a workflow run.
    
    Specified by:
    
    deleteRun in interface AmazonOmics
    
    Parameters:
    
    deleteRunRequest -
    
    Returns:
    
    Result of the DeleteRun operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - deleteRunGroup
```
public DeleteRunGroupResult deleteRunGroup(DeleteRunGroupRequest request)
```
    Deletes a workflow run group.
    
    Specified by:
    
    deleteRunGroup in interface AmazonOmics
    
    Parameters:
    
    deleteRunGroupRequest -
    
    Returns:
    
    Result of the DeleteRunGroup operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - deleteSequenceStore
```
public DeleteSequenceStoreResult deleteSequenceStore(DeleteSequenceStoreRequest request)
```
    Deletes a sequence store.
    
    Specified by:
    
    deleteSequenceStore in interface AmazonOmics
    
    Parameters:
    
    deleteSequenceStoreRequest -
    
    Returns:
    
    Result of the DeleteSequenceStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - deleteShare
```
public DeleteShareResult deleteShare(DeleteShareRequest request)
```
    Deletes a resource share. If you are the resource owner, the subscriber will no longer have access to the shared resource. If you are the subscriber, this operation deletes your access to the share.
    
    Specified by:
    
    deleteShare in interface AmazonOmics
    
    Parameters:
    
    deleteShareRequest -
    
    Returns:
    
    Result of the DeleteShare operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - deleteVariantStore
```
public DeleteVariantStoreResult deleteVariantStore(DeleteVariantStoreRequest request)
```
    Deletes a variant store.
    
    Specified by:
    
    deleteVariantStore in interface AmazonOmics
    
    Parameters:
    
    deleteVariantStoreRequest -
    
    Returns:
    
    Result of the DeleteVariantStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - deleteWorkflow
```
public DeleteWorkflowResult deleteWorkflow(DeleteWorkflowRequest request)
```
    Deletes a workflow.
    
    Specified by:
    
    deleteWorkflow in interface AmazonOmics
    
    Parameters:
    
    deleteWorkflowRequest -
    
    Returns:
    
    Result of the DeleteWorkflow operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getAnnotationImportJob
```
public GetAnnotationImportJobResult getAnnotationImportJob(GetAnnotationImportJobRequest request)
```
    Gets information about an annotation import job.
    
    Specified by:
    
    getAnnotationImportJob in interface AmazonOmics
    
    Parameters:
    
    getAnnotationImportJobRequest -
    
    Returns:
    
    Result of the GetAnnotationImportJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - getAnnotationStore
```
public GetAnnotationStoreResult getAnnotationStore(GetAnnotationStoreRequest request)
```
    Gets information about an annotation store.
    
    Specified by:
    
    getAnnotationStore in interface AmazonOmics
    
    Parameters:
    
    getAnnotationStoreRequest -
    
    Returns:
    
    Result of the GetAnnotationStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - getAnnotationStoreVersion
```
public GetAnnotationStoreVersionResult getAnnotationStoreVersion(GetAnnotationStoreVersionRequest request)
```
    Retrieves the metadata for an annotation store version.
    
    Specified by:
    
    getAnnotationStoreVersion in interface AmazonOmics
    
    Parameters:
    
    getAnnotationStoreVersionRequest -
    
    Returns:
    
    Result of the GetAnnotationStoreVersion operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - getReadSet
```
public GetReadSetResult getReadSet(GetReadSetRequest request)
```
    Gets a file from a read set.
    
    Specified by:
    
    getReadSet in interface AmazonOmics
    
    Parameters:
    
    getReadSetRequest -
    
    Returns:
    
    Result of the GetReadSet operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    RangeNotSatisfiableException - The ranges specified in the request are not valid.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getReadSetActivationJob
```
public GetReadSetActivationJobResult getReadSetActivationJob(GetReadSetActivationJobRequest request)
```
    Gets information about a read set activation job.
    
    Specified by:
    
    getReadSetActivationJob in interface AmazonOmics
    
    Parameters:
    
    getReadSetActivationJobRequest -
    
    Returns:
    
    Result of the GetReadSetActivationJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getReadSetExportJob
```
public GetReadSetExportJobResult getReadSetExportJob(GetReadSetExportJobRequest request)
```
    Gets information about a read set export job.
    
    Specified by:
    
    getReadSetExportJob in interface AmazonOmics
    
    Parameters:
    
    getReadSetExportJobRequest -
    
    Returns:
    
    Result of the GetReadSetExportJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getReadSetImportJob
```
public GetReadSetImportJobResult getReadSetImportJob(GetReadSetImportJobRequest request)
```
    Gets information about a read set import job.
    
    Specified by:
    
    getReadSetImportJob in interface AmazonOmics
    
    Parameters:
    
    getReadSetImportJobRequest -
    
    Returns:
    
    Result of the GetReadSetImportJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getReadSetMetadata
```
public GetReadSetMetadataResult getReadSetMetadata(GetReadSetMetadataRequest request)
```
    Gets details about a read set.
    
    Specified by:
    
    getReadSetMetadata in interface AmazonOmics
    
    Parameters:
    
    getReadSetMetadataRequest -
    
    Returns:
    
    Result of the GetReadSetMetadata operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getReference
```
public GetReferenceResult getReference(GetReferenceRequest request)
```
    Gets a reference file.
    
    Specified by:
    
    getReference in interface AmazonOmics
    
    Parameters:
    
    getReferenceRequest -
    
    Returns:
    
    Result of the GetReference operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    RangeNotSatisfiableException - The ranges specified in the request are not valid.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getReferenceImportJob
```
public GetReferenceImportJobResult getReferenceImportJob(GetReferenceImportJobRequest request)
```
    Gets information about a reference import job.
    
    Specified by:
    
    getReferenceImportJob in interface AmazonOmics
    
    Parameters:
    
    getReferenceImportJobRequest -
    
    Returns:
    
    Result of the GetReferenceImportJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getReferenceMetadata
```
public GetReferenceMetadataResult getReferenceMetadata(GetReferenceMetadataRequest request)
```
    Gets information about a genome reference's metadata.
    
    Specified by:
    
    getReferenceMetadata in interface AmazonOmics
    
    Parameters:
    
    getReferenceMetadataRequest -
    
    Returns:
    
    Result of the GetReferenceMetadata operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getReferenceStore
```
public GetReferenceStoreResult getReferenceStore(GetReferenceStoreRequest request)
```
    Gets information about a reference store.
    
    Specified by:
    
    getReferenceStore in interface AmazonOmics
    
    Parameters:
    
    getReferenceStoreRequest -
    
    Returns:
    
    Result of the GetReferenceStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getRun
```
public GetRunResult getRun(GetRunRequest request)
```
    Gets information about a workflow run.
    
    If a workflow is shared with you, you cannot export information about the run.
    
    Specified by:
    
    getRun in interface AmazonOmics
    
    Parameters:
    
    getRunRequest -
    
    Returns:
    
    Result of the GetRun operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getRunGroup
```
public GetRunGroupResult getRunGroup(GetRunGroupRequest request)
```
    Gets information about a workflow run group.
    
    Specified by:
    
    getRunGroup in interface AmazonOmics
    
    Parameters:
    
    getRunGroupRequest -
    
    Returns:
    
    Result of the GetRunGroup operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getRunTask
```
public GetRunTaskResult getRunTask(GetRunTaskRequest request)
```
    Gets information about a workflow run task.
    
    Specified by:
    
    getRunTask in interface AmazonOmics
    
    Parameters:
    
    getRunTaskRequest -
    
    Returns:
    
    Result of the GetRunTask operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getSequenceStore
```
public GetSequenceStoreResult getSequenceStore(GetSequenceStoreRequest request)
```
    Gets information about a sequence store.
    
    Specified by:
    
    getSequenceStore in interface AmazonOmics
    
    Parameters:
    
    getSequenceStoreRequest -
    
    Returns:
    
    Result of the GetSequenceStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getShare
```
public GetShareResult getShare(GetShareRequest request)
```
    Retrieves the metadata for the specified resource share.
    
    Specified by:
    
    getShare in interface AmazonOmics
    
    Parameters:
    
    getShareRequest -
    
    Returns:
    
    Result of the GetShare operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - getVariantImportJob
```
public GetVariantImportJobResult getVariantImportJob(GetVariantImportJobRequest request)
```
    Gets information about a variant import job.
    
    Specified by:
    
    getVariantImportJob in interface AmazonOmics
    
    Parameters:
    
    getVariantImportJobRequest -
    
    Returns:
    
    Result of the GetVariantImportJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - getVariantStore
```
public GetVariantStoreResult getVariantStore(GetVariantStoreRequest request)
```
    Gets information about a variant store.
    
    Specified by:
    
    getVariantStore in interface AmazonOmics
    
    Parameters:
    
    getVariantStoreRequest -
    
    Returns:
    
    Result of the GetVariantStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - getWorkflow
```
public GetWorkflowResult getWorkflow(GetWorkflowRequest request)
```
    Gets information about a workflow.
    
    If a workflow is shared with you, you cannot export the workflow.
    
    Specified by:
    
    getWorkflow in interface AmazonOmics
    
    Parameters:
    
    getWorkflowRequest -
    
    Returns:
    
    Result of the GetWorkflow operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listAnnotationImportJobs
```
public ListAnnotationImportJobsResult listAnnotationImportJobs(ListAnnotationImportJobsRequest request)
```
    Retrieves a list of annotation import jobs.
    
    Specified by:
    
    listAnnotationImportJobs in interface AmazonOmics
    
    Parameters:
    
    listAnnotationImportJobsRequest -
    
    Returns:
    
    Result of the ListAnnotationImportJobs operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - listAnnotationStoreVersions
```
public ListAnnotationStoreVersionsResult listAnnotationStoreVersions(ListAnnotationStoreVersionsRequest request)
```
    Lists the versions of an annotation store.
    
    Specified by:
    
    listAnnotationStoreVersions in interface AmazonOmics
    
    Parameters:
    
    listAnnotationStoreVersionsRequest -
    
    Returns:
    
    Result of the ListAnnotationStoreVersions operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - listAnnotationStores
```
public ListAnnotationStoresResult listAnnotationStores(ListAnnotationStoresRequest request)
```
    Retrieves a list of annotation stores.
    
    Specified by:
    
    listAnnotationStores in interface AmazonOmics
    
    Parameters:
    
    listAnnotationStoresRequest -
    
    Returns:
    
    Result of the ListAnnotationStores operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - listMultipartReadSetUploads
```
public ListMultipartReadSetUploadsResult listMultipartReadSetUploads(ListMultipartReadSetUploadsRequest request)
```
    Lists multipart read set uploads and for in progress uploads. Once the upload is completed, a read set is created and the upload will no longer be returned in the response.
    
    Specified by:
    
    listMultipartReadSetUploads in interface AmazonOmics
    
    Parameters:
    
    listMultipartReadSetUploadsRequest -
    
    Returns:
    
    Result of the ListMultipartReadSetUploads operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    NotSupportedOperationException - The operation is not supported by Amazon Omics, or the API does not exist.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listReadSetActivationJobs
```
public ListReadSetActivationJobsResult listReadSetActivationJobs(ListReadSetActivationJobsRequest request)
```
    Retrieves a list of read set activation jobs.
    
    Specified by:
    
    listReadSetActivationJobs in interface AmazonOmics
    
    Parameters:
    
    listReadSetActivationJobsRequest -
    
    Returns:
    
    Result of the ListReadSetActivationJobs operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listReadSetExportJobs
```
public ListReadSetExportJobsResult listReadSetExportJobs(ListReadSetExportJobsRequest request)
```
    Retrieves a list of read set export jobs.
    
    Specified by:
    
    listReadSetExportJobs in interface AmazonOmics
    
    Parameters:
    
    listReadSetExportJobsRequest -
    
    Returns:
    
    Result of the ListReadSetExportJobs operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listReadSetImportJobs
```
public ListReadSetImportJobsResult listReadSetImportJobs(ListReadSetImportJobsRequest request)
```
    Retrieves a list of read set import jobs.
    
    Specified by:
    
    listReadSetImportJobs in interface AmazonOmics
    
    Parameters:
    
    listReadSetImportJobsRequest -
    
    Returns:
    
    Result of the ListReadSetImportJobs operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listReadSetUploadParts
```
public ListReadSetUploadPartsResult listReadSetUploadParts(ListReadSetUploadPartsRequest request)
```
    This operation will list all parts in a requested multipart upload for a sequence store.
    
    Specified by:
    
    listReadSetUploadParts in interface AmazonOmics
    
    Parameters:
    
    listReadSetUploadPartsRequest -
    
    Returns:
    
    Result of the ListReadSetUploadParts operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    NotSupportedOperationException - The operation is not supported by Amazon Omics, or the API does not exist.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listReadSets
```
public ListReadSetsResult listReadSets(ListReadSetsRequest request)
```
    Retrieves a list of read sets.
    
    Specified by:
    
    listReadSets in interface AmazonOmics
    
    Parameters:
    
    listReadSetsRequest -
    
    Returns:
    
    Result of the ListReadSets operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listReferenceImportJobs
```
public ListReferenceImportJobsResult listReferenceImportJobs(ListReferenceImportJobsRequest request)
```
    Retrieves a list of reference import jobs.
    
    Specified by:
    
    listReferenceImportJobs in interface AmazonOmics
    
    Parameters:
    
    listReferenceImportJobsRequest -
    
    Returns:
    
    Result of the ListReferenceImportJobs operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listReferenceStores
```
public ListReferenceStoresResult listReferenceStores(ListReferenceStoresRequest request)
```
    Retrieves a list of reference stores.
    
    Specified by:
    
    listReferenceStores in interface AmazonOmics
    
    Parameters:
    
    listReferenceStoresRequest -
    
    Returns:
    
    Result of the ListReferenceStores operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listReferences
```
public ListReferencesResult listReferences(ListReferencesRequest request)
```
    Retrieves a list of references.
    
    Specified by:
    
    listReferences in interface AmazonOmics
    
    Parameters:
    
    listReferencesRequest -
    
    Returns:
    
    Result of the ListReferences operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listRunGroups
```
public ListRunGroupsResult listRunGroups(ListRunGroupsRequest request)
```
    Retrieves a list of run groups.
    
    Specified by:
    
    listRunGroups in interface AmazonOmics
    
    Parameters:
    
    listRunGroupsRequest -
    
    Returns:
    
    Result of the ListRunGroups operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listRunTasks
```
public ListRunTasksResult listRunTasks(ListRunTasksRequest request)
```
    Retrieves a list of tasks for a run.
    
    Specified by:
    
    listRunTasks in interface AmazonOmics
    
    Parameters:
    
    listRunTasksRequest -
    
    Returns:
    
    Result of the ListRunTasks operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listRuns
```
public ListRunsResult listRuns(ListRunsRequest request)
```
    Retrieves a list of runs.
    
    Specified by:
    
    listRuns in interface AmazonOmics
    
    Parameters:
    
    listRunsRequest -
    
    Returns:
    
    Result of the ListRuns operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listSequenceStores
```
public ListSequenceStoresResult listSequenceStores(ListSequenceStoresRequest request)
```
    Retrieves a list of sequence stores.
    
    Specified by:
    
    listSequenceStores in interface AmazonOmics
    
    Parameters:
    
    listSequenceStoresRequest -
    
    Returns:
    
    Result of the ListSequenceStores operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listShares
```
public ListSharesResult listShares(ListSharesRequest request)
```
    Retrieves the resource shares associated with an account. Use the filter parameter to retrieve a specific subset of the shares.
    
    Specified by:
    
    listShares in interface AmazonOmics
    
    Parameters:
    
    listSharesRequest -
    
    Returns:
    
    Result of the ListShares operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - listTagsForResource
```
public ListTagsForResourceResult listTagsForResource(ListTagsForResourceRequest request)
```
    Retrieves a list of tags for a resource.
    
    Specified by:
    
    listTagsForResource in interface AmazonOmics
    
    Parameters:
    
    listTagsForResourceRequest -
    
    Returns:
    
    Result of the ListTagsForResource operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - listVariantImportJobs
```
public ListVariantImportJobsResult listVariantImportJobs(ListVariantImportJobsRequest request)
```
    Retrieves a list of variant import jobs.
    
    Specified by:
    
    listVariantImportJobs in interface AmazonOmics
    
    Parameters:
    
    listVariantImportJobsRequest -
    
    Returns:
    
    Result of the ListVariantImportJobs operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - listVariantStores
```
public ListVariantStoresResult listVariantStores(ListVariantStoresRequest request)
```
    Retrieves a list of variant stores.
    
    Specified by:
    
    listVariantStores in interface AmazonOmics
    
    Parameters:
    
    listVariantStoresRequest -
    
    Returns:
    
    Result of the ListVariantStores operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - listWorkflows
```
public ListWorkflowsResult listWorkflows(ListWorkflowsRequest request)
```
    Retrieves a list of workflows.
    
    Specified by:
    
    listWorkflows in interface AmazonOmics
    
    Parameters:
    
    listWorkflowsRequest -
    
    Returns:
    
    Result of the ListWorkflows operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - startAnnotationImportJob
```
public StartAnnotationImportJobResult startAnnotationImportJob(StartAnnotationImportJobRequest request)
```
    Starts an annotation import job.
    
    Specified by:
    
    startAnnotationImportJob in interface AmazonOmics
    
    Parameters:
    
    startAnnotationImportJobRequest -
    
    Returns:
    
    Result of the StartAnnotationImportJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - startReadSetActivationJob
```
public StartReadSetActivationJobResult startReadSetActivationJob(StartReadSetActivationJobRequest request)
```
    Activates an archived read set. To reduce storage charges, Amazon Omics archives unused read sets after 30 days.
    
    Specified by:
    
    startReadSetActivationJob in interface AmazonOmics
    
    Parameters:
    
    startReadSetActivationJobRequest -
    
    Returns:
    
    Result of the StartReadSetActivationJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - startReadSetExportJob
```
public StartReadSetExportJobResult startReadSetExportJob(StartReadSetExportJobRequest request)
```
    Exports a read set to Amazon S3.
    
    Specified by:
    
    startReadSetExportJob in interface AmazonOmics
    
    Parameters:
    
    startReadSetExportJobRequest -
    
    Returns:
    
    Result of the StartReadSetExportJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - startReadSetImportJob
```
public StartReadSetImportJobResult startReadSetImportJob(StartReadSetImportJobRequest request)
```
    Starts a read set import job.
    
    Specified by:
    
    startReadSetImportJob in interface AmazonOmics
    
    Parameters:
    
    startReadSetImportJobRequest -
    
    Returns:
    
    Result of the StartReadSetImportJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - startReferenceImportJob
```
public StartReferenceImportJobResult startReferenceImportJob(StartReferenceImportJobRequest request)
```
    Starts a reference import job.
    
    Specified by:
    
    startReferenceImportJob in interface AmazonOmics
    
    Parameters:
    
    startReferenceImportJobRequest -
    
    Returns:
    
    Result of the StartReferenceImportJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - startRun
```
public StartRunResult startRun(StartRunRequest request)
```
    Starts a workflow run. To duplicate a run, specify the run's ID and a role ARN. The remaining parameters are copied from the previous run.
    
    StartRun will not support re-run for a workflow that is shared with you.
    
    The total number of runs in your account is subject to a quota per Region. To avoid needing to delete runs manually, you can set the retention mode to REMOVE. Runs with this setting are deleted automatically when the run quoata is exceeded.
    
    By default, the run uses STATIC storage. For STATIC storage, set the storageCapacity field. You can set the storage type to DYNAMIC. You do not set storageCapacity, because HealthOmics dynamically scales the storage up or down as required. For more information about static and dynamic storage, see Running workflows in the AWS HealthOmics User Guide.
    
    Specified by:
    
    startRun in interface AmazonOmics
    
    Parameters:
    
    startRunRequest -
    
    Returns:
    
    Result of the StartRun operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - startVariantImportJob
```
public StartVariantImportJobResult startVariantImportJob(StartVariantImportJobRequest request)
```
    Starts a variant import job.
    
    Specified by:
    
    startVariantImportJob in interface AmazonOmics
    
    Parameters:
    
    startVariantImportJobRequest -
    
    Returns:
    
    Result of the StartVariantImportJob operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - tagResource
```
public TagResourceResult tagResource(TagResourceRequest request)
```
    Tags a resource.
    
    Specified by:
    
    tagResource in interface AmazonOmics
    
    Parameters:
    
    tagResourceRequest -
    
    Returns:
    
    Result of the TagResource operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - untagResource
```
public UntagResourceResult untagResource(UntagResourceRequest request)
```
    Removes tags from a resource.
    
    Specified by:
    
    untagResource in interface AmazonOmics
    
    Parameters:
    
    untagResourceRequest -
    
    Returns:
    
    Result of the UntagResource operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - updateAnnotationStore
```
public UpdateAnnotationStoreResult updateAnnotationStore(UpdateAnnotationStoreRequest request)
```
    Updates an annotation store.
    
    Specified by:
    
    updateAnnotationStore in interface AmazonOmics
    
    Parameters:
    
    updateAnnotationStoreRequest -
    
    Returns:
    
    Result of the UpdateAnnotationStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - updateAnnotationStoreVersion
```
public UpdateAnnotationStoreVersionResult updateAnnotationStoreVersion(UpdateAnnotationStoreVersionRequest request)
```
    Updates the description of an annotation store version.
    
    Specified by:
    
    updateAnnotationStoreVersion in interface AmazonOmics
    
    Parameters:
    
    updateAnnotationStoreVersionRequest -
    
    Returns:
    
    Result of the UpdateAnnotationStoreVersion operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - updateRunGroup
```
public UpdateRunGroupResult updateRunGroup(UpdateRunGroupRequest request)
```
    Updates a run group.
    
    Specified by:
    
    updateRunGroup in interface AmazonOmics
    
    Parameters:
    
    updateRunGroupRequest -
    
    Returns:
    
    Result of the UpdateRunGroup operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - updateVariantStore
```
public UpdateVariantStoreResult updateVariantStore(UpdateVariantStoreRequest request)
```
    Updates a variant store.
    
    Specified by:
    
    updateVariantStore in interface AmazonOmics
    
    Parameters:
    
    updateVariantStoreRequest -
    
    Returns:
    
    Result of the UpdateVariantStore operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    See Also:
    
    AWS API Documentation
  - updateWorkflow
```
public UpdateWorkflowResult updateWorkflow(UpdateWorkflowRequest request)
```
    Updates a workflow.
    
    Specified by:
    
    updateWorkflow in interface AmazonOmics
    
    Parameters:
    
    updateWorkflowRequest -
    
    Returns:
    
    Result of the UpdateWorkflow operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ConflictException - The request cannot be applied to the target resource in its current state.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - uploadReadSetPart
```
public UploadReadSetPartResult uploadReadSetPart(UploadReadSetPartRequest request)
```
    This operation uploads a specific part of a read set. If you upload a new part using a previously used part number, the previously uploaded part will be overwritten.
    
    Specified by:
    
    uploadReadSetPart in interface AmazonOmics
    
    Parameters:
    
    uploadReadSetPartRequest -
    
    Returns:
    
    Result of the UploadReadSetPart operation returned by the service.
    
    Throws:
    
    InternalServerException - An unexpected error occurred. Try the request again.
    
    NotSupportedOperationException - The operation is not supported by Amazon Omics, or the API does not exist.
    
    ServiceQuotaExceededException - The request exceeds a service quota.
    
    ThrottlingException - The request was denied due to request throttling.
    
    ValidationException - The input fails to satisfy the constraints specified by an AWS service.
    
    ResourceNotFoundException - The target resource was not found in the current Region.
    
    AccessDeniedException - You do not have sufficient access to perform this action.
    
    RequestTimeoutException - The request timed out.
    
    See Also:
    
    AWS API Documentation
  - getCachedResponseMetadata
```
public ResponseMetadata getCachedResponseMetadata(AmazonWebServiceRequest request)
```
    Returns additional metadata for a previously executed successful, request, typically used for debugging issues where a service isn't acting as expected. This data isn't considered part of the result data returned by an operation, so it's available through this separate, diagnostic interface.
    Response metadata is only cached for a limited period of time, so if you need to access this extra diagnostic information for an executed request, you should use this method to retrieve it as soon as possible after executing the request.
    
    Specified by:
    
    getCachedResponseMetadata in interface AmazonOmics
    
    Parameters:
    
    request - The originally executed request
    
    Returns:
    
    The response metadata for the specified request, or null if none is available.
  - waiters
```
public AmazonOmicsWaiters waiters()
```
    Specified by:
    
    waiters in interface AmazonOmics
  - shutdown
```
public void shutdown()
```
    Description copied from interface: AmazonOmics
    
    Shuts down this client object, releasing any resources that might be held open. This is an optional method, and callers are not expected to call it, but can if they want to explicitly release any open resources. Once a client has been shutdown, it should not be used to make any more requests.
    
    Specified by:
    
    shutdown in interface AmazonOmics
    
    Overrides:
    
    shutdown in class AmazonWebServiceClient

Class AmazonOmicsClient

Field Summary

Fields inherited from class com.amazonaws.AmazonWebServiceClient

Fields inherited from interface com.amazonaws.services.omics.AmazonOmics

Method Summary

Methods inherited from class com.amazonaws.AmazonWebServiceClient

Methods inherited from class java.lang.Object

Field Detail

configFactory

Method Detail

builder

abortMultipartReadSetUpload

acceptShare

batchDeleteReadSet

cancelAnnotationImportJob

cancelRun

cancelVariantImportJob

completeMultipartReadSetUpload

createAnnotationStore

createAnnotationStoreVersion

createMultipartReadSetUpload

createReferenceStore

createRunGroup

createSequenceStore

createShare

createVariantStore

createWorkflow

deleteAnnotationStore

deleteAnnotationStoreVersions

deleteReference

deleteReferenceStore

deleteRun

deleteRunGroup

deleteSequenceStore

deleteShare

deleteVariantStore

deleteWorkflow

getAnnotationImportJob

getAnnotationStore

getAnnotationStoreVersion

getReadSet

getReadSetActivationJob

getReadSetExportJob

getReadSetImportJob

getReadSetMetadata

getReference

getReferenceImportJob

getReferenceMetadata

getReferenceStore

getRun

getRunGroup

getRunTask

getSequenceStore

getShare

getVariantImportJob

getVariantStore

getWorkflow

listAnnotationImportJobs

listAnnotationStoreVersions

listAnnotationStores

listMultipartReadSetUploads

listReadSetActivationJobs

listReadSetExportJobs

listReadSetImportJobs

listReadSetUploadParts

listReadSets

listReferenceImportJobs

listReferenceStores

listReferences

listRunGroups

listRunTasks

listRuns

listSequenceStores

listShares

listTagsForResource

listVariantImportJobs

listVariantStores

listWorkflows

startAnnotationImportJob

startReadSetActivationJob