GenotypeConcordanceStates

```
public class GenotypeConcordanceStates
extends java.lang.Object
```
A class to store the various classifications for: 1. a truth genotype versus a reference 2. a call genotype versus a truth, relative to a reference An example use of this class is to have one instance per following use case: - SNPs - indels - filtered variant (truth or call) - filtered genotype (truth or call) - low GQ (call) - low DP (call) - No call (truth or call) - No variant (truth or call) *

Nested Classes
Modifier and Type	Class and Description
`static class`	`GenotypeConcordanceStates.CallState` These states represent the relationship between the call genotype and the truth genotype relative to a reference sequence.
`static class`	`GenotypeConcordanceStates.ContingencyState` A specific state for a 2x2 contingency table.
`static class`	`GenotypeConcordanceStates.TruthAndCallStates` A minute class to store the truth and call state respectively.
`static class`	`GenotypeConcordanceStates.TruthState` These states represent the relationship between a truth genotype and the reference sequence.

Constructors
Constructor and Description
`GenotypeConcordanceStates()`

Method Summary
- Methods inherited from class java.lang.Object
  clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - GenotypeConcordanceStates
```
public GenotypeConcordanceStates()
```

Class GenotypeConcordanceStates