| Class | Description |
|---|---|
| CompressionHeaderFactory | |
| CompressionHeaderFactory.EncodingLengthCalculator | |
| CompressionHeaderFactory.HuffmanParamsCalculator | |
| CompressionHeaderFactory.IntegerEncodingCalculator | |
| ContainerFactory | |
| ContainerParser | |
| Cram2SamRecordFactory | |
| CramContainerIterator |
An iterator of CRAM containers read from an
InputStream. |
| CramIO |
A collection of methods to open and close CRAM files.
|
| CramNormalizer | |
| CramSpanContainerIterator |
An iterator of CRAM containers read from locations in
SeekableStream. |
| Sam2CramRecordFactory |