htsjdk.variant.variantcontext.filter

Class PassingVariantFilter

java.lang.Object

htsjdk.variant.variantcontext.filter.PassingVariantFilter

All Implemented Interfaces:

VariantContextFilter

public class PassingVariantFilter
extends java.lang.Object
implements VariantContextFilter

A Predicate on VariantContexts that returns true at sites that are either unfiltered, or passing (as variants).

Constructor Summary

Constructors

Constructor and Description
PassingVariantFilter()

Method Summary

Modifier and Type	Method and Description
boolean	test(VariantContext variantContext) Determines whether a VariantContext matches this filter

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PassingVariantFilter

public PassingVariantFilter()

Method Detail

test

public boolean test(VariantContext variantContext)

Description copied from interface: VariantContextFilter

Determines whether a VariantContext matches this filter

Specified by:

test in interface VariantContextFilter

Parameters:

variantContext - the record to examine for being a SNP

Returns:

true if variantContext is a SNP