GenomicsDBExportConfiguration.ExportConfiguration.Builder (com.intel:genomicsdb-gatk4 0.4.0 API)

java.lang.Object
- com.google.protobuf.AbstractMessageLite.Builder<BuilderType>
- - com.google.protobuf.AbstractMessage.Builder<BuilderType>
  - - com.google.protobuf.GeneratedMessage.Builder<GenomicsDBExportConfiguration.ExportConfiguration.Builder>
    - - com.intel.genomicsdb.GenomicsDBExportConfiguration.ExportConfiguration.Builder

All Implemented Interfaces:

com.google.protobuf.Message.Builder, com.google.protobuf.MessageLite.Builder, com.google.protobuf.MessageLiteOrBuilder, com.google.protobuf.MessageOrBuilder, GenomicsDBExportConfiguration.ExportConfigurationOrBuilder, Cloneable

Enclosing class:

GenomicsDBExportConfiguration.ExportConfiguration
```
public static final class GenomicsDBExportConfiguration.ExportConfiguration.Builder
extends com.google.protobuf.GeneratedMessage.Builder<GenomicsDBExportConfiguration.ExportConfiguration.Builder>
implements GenomicsDBExportConfiguration.ExportConfigurationOrBuilder
```
Protobuf type ExportConfiguration

Field Summary

Fields
Modifier and Type	Field and Description
`private com.google.protobuf.LazyStringList`	`attributes_`
`private int`	`bitField0_`
`private List<GenomicsDBExportConfiguration.ColumnRangeList>`	`queryColumnRanges_`
`private com.google.protobuf.RepeatedFieldBuilder<GenomicsDBExportConfiguration.ColumnRangeList,GenomicsDBExportConfiguration.ColumnRangeList.Builder,GenomicsDBExportConfiguration.ColumnRangeListOrBuilder>`	`queryColumnRangesBuilder_`
`private Object`	`referenceGenome_`
`private Object`	`tiledbArrayName_`
`private Object`	`tiledbWorkspace_`

Constructor Summary

Constructors
Modifier Constructor and Description

private Builder()

private Builder(com.google.protobuf.GeneratedMessage.BuilderParent parent)

Constructors
Modifier	Constructor and Description
`private`	`Builder()`
`private`	`Builder(com.google.protobuf.GeneratedMessage.BuilderParent parent)`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`addAllAttributes(Iterable<String> values)` `repeated string attributes = 5;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`addAllQueryColumnRanges(Iterable<? extends GenomicsDBExportConfiguration.ColumnRangeList> values)` `repeated .ColumnRangeList query_column_ranges = 4;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`addAttributes(String value)` `repeated string attributes = 5;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`addAttributesBytes(com.google.protobuf.ByteString value)` `repeated string attributes = 5;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`addQueryColumnRanges(GenomicsDBExportConfiguration.ColumnRangeList.Builder builderForValue)` `repeated .ColumnRangeList query_column_ranges = 4;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`addQueryColumnRanges(GenomicsDBExportConfiguration.ColumnRangeList value)` `repeated .ColumnRangeList query_column_ranges = 4;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`addQueryColumnRanges(int index, GenomicsDBExportConfiguration.ColumnRangeList.Builder builderForValue)` `repeated .ColumnRangeList query_column_ranges = 4;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`addQueryColumnRanges(int index, GenomicsDBExportConfiguration.ColumnRangeList value)` `repeated .ColumnRangeList query_column_ranges = 4;`
`GenomicsDBExportConfiguration.ColumnRangeList.Builder`	`addQueryColumnRangesBuilder()` `repeated .ColumnRangeList query_column_ranges = 4;`
`GenomicsDBExportConfiguration.ColumnRangeList.Builder`	`addQueryColumnRangesBuilder(int index)` `repeated .ColumnRangeList query_column_ranges = 4;`
`GenomicsDBExportConfiguration.ExportConfiguration`	`build()`
`GenomicsDBExportConfiguration.ExportConfiguration`	`buildPartial()`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`clear()`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`clearAttributes()` `repeated string attributes = 5;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`clearQueryColumnRanges()` `repeated .ColumnRangeList query_column_ranges = 4;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`clearReferenceGenome()` `required string reference_genome = 3;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`clearTiledbArrayName()` `required string tiledb_array_name = 2;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`clearTiledbWorkspace()` `required string tiledb_workspace = 1;`
`private void`	`ensureAttributesIsMutable()`
`private void`	`ensureQueryColumnRangesIsMutable()`
`String`	`getAttributes(int index)` `repeated string attributes = 5;`
`com.google.protobuf.ByteString`	`getAttributesBytes(int index)` `repeated string attributes = 5;`
`int`	`getAttributesCount()` `repeated string attributes = 5;`
`com.google.protobuf.ProtocolStringList`	`getAttributesList()` `repeated string attributes = 5;`
`GenomicsDBExportConfiguration.ExportConfiguration`	`getDefaultInstanceForType()`
`static com.google.protobuf.Descriptors.Descriptor`	`getDescriptor()`
`com.google.protobuf.Descriptors.Descriptor`	`getDescriptorForType()`
`GenomicsDBExportConfiguration.ColumnRangeList`	`getQueryColumnRanges(int index)` `repeated .ColumnRangeList query_column_ranges = 4;`
`GenomicsDBExportConfiguration.ColumnRangeList.Builder`	`getQueryColumnRangesBuilder(int index)` `repeated .ColumnRangeList query_column_ranges = 4;`
`List<GenomicsDBExportConfiguration.ColumnRangeList.Builder>`	`getQueryColumnRangesBuilderList()` `repeated .ColumnRangeList query_column_ranges = 4;`
`int`	`getQueryColumnRangesCount()` `repeated .ColumnRangeList query_column_ranges = 4;`
`private com.google.protobuf.RepeatedFieldBuilder<GenomicsDBExportConfiguration.ColumnRangeList,GenomicsDBExportConfiguration.ColumnRangeList.Builder,GenomicsDBExportConfiguration.ColumnRangeListOrBuilder>`	`getQueryColumnRangesFieldBuilder()`
`List<GenomicsDBExportConfiguration.ColumnRangeList>`	`getQueryColumnRangesList()` `repeated .ColumnRangeList query_column_ranges = 4;`
`GenomicsDBExportConfiguration.ColumnRangeListOrBuilder`	`getQueryColumnRangesOrBuilder(int index)` `repeated .ColumnRangeList query_column_ranges = 4;`
`List<? extends GenomicsDBExportConfiguration.ColumnRangeListOrBuilder>`	`getQueryColumnRangesOrBuilderList()` `repeated .ColumnRangeList query_column_ranges = 4;`
`String`	`getReferenceGenome()` `required string reference_genome = 3;`
`com.google.protobuf.ByteString`	`getReferenceGenomeBytes()` `required string reference_genome = 3;`
`String`	`getTiledbArrayName()` `required string tiledb_array_name = 2;`
`com.google.protobuf.ByteString`	`getTiledbArrayNameBytes()` `required string tiledb_array_name = 2;`
`String`	`getTiledbWorkspace()` `required string tiledb_workspace = 1;`
`com.google.protobuf.ByteString`	`getTiledbWorkspaceBytes()` `required string tiledb_workspace = 1;`
`boolean`	`hasReferenceGenome()` `required string reference_genome = 3;`
`boolean`	`hasTiledbArrayName()` `required string tiledb_array_name = 2;`
`boolean`	`hasTiledbWorkspace()` `required string tiledb_workspace = 1;`
`protected com.google.protobuf.GeneratedMessage.FieldAccessorTable`	`internalGetFieldAccessorTable()`
`boolean`	`isInitialized()`
`private void`	`maybeForceBuilderInitialization()`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`mergeFrom(com.google.protobuf.CodedInputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`mergeFrom(GenomicsDBExportConfiguration.ExportConfiguration other)`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`mergeFrom(com.google.protobuf.Message other)`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`removeQueryColumnRanges(int index)` `repeated .ColumnRangeList query_column_ranges = 4;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`setAttributes(int index, String value)` `repeated string attributes = 5;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`setQueryColumnRanges(int index, GenomicsDBExportConfiguration.ColumnRangeList.Builder builderForValue)` `repeated .ColumnRangeList query_column_ranges = 4;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`setQueryColumnRanges(int index, GenomicsDBExportConfiguration.ColumnRangeList value)` `repeated .ColumnRangeList query_column_ranges = 4;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`setReferenceGenome(String value)` `required string reference_genome = 3;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`setReferenceGenomeBytes(com.google.protobuf.ByteString value)` `required string reference_genome = 3;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`setTiledbArrayName(String value)` `required string tiledb_array_name = 2;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`setTiledbArrayNameBytes(com.google.protobuf.ByteString value)` `required string tiledb_array_name = 2;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`setTiledbWorkspace(String value)` `required string tiledb_workspace = 1;`
`GenomicsDBExportConfiguration.ExportConfiguration.Builder`	`setTiledbWorkspaceBytes(com.google.protobuf.ByteString value)` `required string tiledb_workspace = 1;`

Methods inherited from class com.google.protobuf.GeneratedMessage.Builder
addRepeatedField, clearField, clearOneof, clone, getAllFields, getField, getFieldBuilder, getOneofFieldDescriptor, getParentForChildren, getRepeatedField, getRepeatedFieldBuilder, getRepeatedFieldCount, getUnknownFields, hasField, hasOneof, internalGetMapField, internalGetMutableMapField, isClean, markClean, mergeUnknownFields, newBuilderForField, onBuilt, onChanged, parseUnknownField, setField, setRepeatedField, setUnknownFields

Methods inherited from class com.google.protobuf.AbstractMessage.Builder
findInitializationErrors, getInitializationErrorString, mergeDelimitedFrom, mergeDelimitedFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, newUninitializedMessageException, toString

Methods inherited from class com.google.protobuf.AbstractMessageLite.Builder
addAll, newUninitializedMessageException

Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface com.google.protobuf.MessageOrBuilder
findInitializationErrors, getAllFields, getField, getInitializationErrorString, getOneofFieldDescriptor, getRepeatedField, getRepeatedFieldCount, getUnknownFields, hasField, hasOneof

Field Detail

bitField0_
```
private int bitField0_
```

tiledbWorkspace_
```
private Object tiledbWorkspace_
```

tiledbArrayName_
```
private Object tiledbArrayName_
```

referenceGenome_
```
private Object referenceGenome_
```

queryColumnRanges_

private List<GenomicsDBExportConfiguration.ColumnRangeList> queryColumnRanges_

queryColumnRangesBuilder_

private com.google.protobuf.RepeatedFieldBuilder<GenomicsDBExportConfiguration.ColumnRangeList,GenomicsDBExportConfiguration.ColumnRangeList.Builder,GenomicsDBExportConfiguration.ColumnRangeListOrBuilder> queryColumnRangesBuilder_

attributes_

private com.google.protobuf.LazyStringList attributes_

Constructor Detail

Builder
```
private Builder()
```

Builder

private Builder(com.google.protobuf.GeneratedMessage.BuilderParent parent)

Method Detail

getDescriptor

public static final com.google.protobuf.Descriptors.Descriptor getDescriptor()

internalGetFieldAccessorTable
```
protected com.google.protobuf.GeneratedMessage.FieldAccessorTable internalGetFieldAccessorTable()
```
Specified by:

internalGetFieldAccessorTable in class com.google.protobuf.GeneratedMessage.Builder<GenomicsDBExportConfiguration.ExportConfiguration.Builder>

maybeForceBuilderInitialization

private void maybeForceBuilderInitialization()

clear
```
public GenomicsDBExportConfiguration.ExportConfiguration.Builder clear()
```
Specified by:

clear in interface com.google.protobuf.Message.Builder

Specified by:

clear in interface com.google.protobuf.MessageLite.Builder

Overrides:

clear in class com.google.protobuf.GeneratedMessage.Builder<GenomicsDBExportConfiguration.ExportConfiguration.Builder>

getDescriptorForType
```
public com.google.protobuf.Descriptors.Descriptor getDescriptorForType()
```
Specified by:

getDescriptorForType in interface com.google.protobuf.Message.Builder

Specified by:

getDescriptorForType in interface com.google.protobuf.MessageOrBuilder

Overrides:

getDescriptorForType in class com.google.protobuf.GeneratedMessage.Builder<GenomicsDBExportConfiguration.ExportConfiguration.Builder>

getDefaultInstanceForType
```
public GenomicsDBExportConfiguration.ExportConfiguration getDefaultInstanceForType()
```
Specified by:

getDefaultInstanceForType in interface com.google.protobuf.MessageLiteOrBuilder

Specified by:

getDefaultInstanceForType in interface com.google.protobuf.MessageOrBuilder

build
```
public GenomicsDBExportConfiguration.ExportConfiguration build()
```
Specified by:

build in interface com.google.protobuf.Message.Builder

Specified by:

build in interface com.google.protobuf.MessageLite.Builder

buildPartial
```
public GenomicsDBExportConfiguration.ExportConfiguration buildPartial()
```
Specified by:

buildPartial in interface com.google.protobuf.Message.Builder

Specified by:

buildPartial in interface com.google.protobuf.MessageLite.Builder

mergeFrom
```
public GenomicsDBExportConfiguration.ExportConfiguration.Builder mergeFrom(com.google.protobuf.Message other)
```
Specified by:

mergeFrom in interface com.google.protobuf.Message.Builder

Overrides:

mergeFrom in class com.google.protobuf.AbstractMessage.Builder<GenomicsDBExportConfiguration.ExportConfiguration.Builder>

mergeFrom

public GenomicsDBExportConfiguration.ExportConfiguration.Builder mergeFrom(GenomicsDBExportConfiguration.ExportConfiguration other)

isInitialized
```
public final boolean isInitialized()
```
Specified by:

isInitialized in interface com.google.protobuf.MessageLiteOrBuilder

Overrides:

isInitialized in class com.google.protobuf.GeneratedMessage.Builder<GenomicsDBExportConfiguration.ExportConfiguration.Builder>

mergeFrom

public GenomicsDBExportConfiguration.ExportConfiguration.Builder mergeFrom(com.google.protobuf.CodedInputStream input,
                                                                           com.google.protobuf.ExtensionRegistryLite extensionRegistry)
                                                                    throws IOException

Specified by:: mergeFrom in interface com.google.protobuf.Message.Builder
Specified by:: mergeFrom in interface com.google.protobuf.MessageLite.Builder
Overrides:: mergeFrom in class com.google.protobuf.AbstractMessage.Builder<GenomicsDBExportConfiguration.ExportConfiguration.Builder>
Throws:: IOException

hasTiledbWorkspace
```
public boolean hasTiledbWorkspace()
```
required string tiledb_workspace = 1;

Specified by:

hasTiledbWorkspace in interface GenomicsDBExportConfiguration.ExportConfigurationOrBuilder

getTiledbWorkspace
```
public String getTiledbWorkspace()
```
required string tiledb_workspace = 1;

Specified by:

getTiledbWorkspace in interface GenomicsDBExportConfiguration.ExportConfigurationOrBuilder

getTiledbWorkspaceBytes
```
public com.google.protobuf.ByteString getTiledbWorkspaceBytes()
```
required string tiledb_workspace = 1;

Specified by:

getTiledbWorkspaceBytes in interface GenomicsDBExportConfiguration.ExportConfigurationOrBuilder

setTiledbWorkspace

public GenomicsDBExportConfiguration.ExportConfiguration.Builder setTiledbWorkspace(String value)

required string tiledb_workspace = 1;

clearTiledbWorkspace

public GenomicsDBExportConfiguration.ExportConfiguration.Builder clearTiledbWorkspace()

required string tiledb_workspace = 1;

setTiledbWorkspaceBytes

public GenomicsDBExportConfiguration.ExportConfiguration.Builder setTiledbWorkspaceBytes(com.google.protobuf.ByteString value)

required string tiledb_workspace = 1;

hasTiledbArrayName
```
public boolean hasTiledbArrayName()
```
required string tiledb_array_name = 2;

Specified by:

hasTiledbArrayName in interface GenomicsDBExportConfiguration.ExportConfigurationOrBuilder

getTiledbArrayName
```
public String getTiledbArrayName()
```
required string tiledb_array_name = 2;

Specified by:

getTiledbArrayName in interface GenomicsDBExportConfiguration.ExportConfigurationOrBuilder

getTiledbArrayNameBytes
```
public com.google.protobuf.ByteString getTiledbArrayNameBytes()
```
required string tiledb_array_name = 2;

Specified by:

getTiledbArrayNameBytes in interface GenomicsDBExportConfiguration.ExportConfigurationOrBuilder

setTiledbArrayName

public GenomicsDBExportConfiguration.ExportConfiguration.Builder setTiledbArrayName(String value)

required string tiledb_array_name = 2;

clearTiledbArrayName

public GenomicsDBExportConfiguration.ExportConfiguration.Builder clearTiledbArrayName()

required string tiledb_array_name = 2;

setTiledbArrayNameBytes

public GenomicsDBExportConfiguration.ExportConfiguration.Builder setTiledbArrayNameBytes(com.google.protobuf.ByteString value)

required string tiledb_array_name = 2;

hasReferenceGenome
```
public boolean hasReferenceGenome()
```
required string reference_genome = 3;

Specified by:

hasReferenceGenome in interface GenomicsDBExportConfiguration.ExportConfigurationOrBuilder

getReferenceGenome
```
public String getReferenceGenome()
```
required string reference_genome = 3;

Specified by:

getReferenceGenome in interface GenomicsDBExportConfiguration.ExportConfigurationOrBuilder

getReferenceGenomeBytes
```
public com.google.protobuf.ByteString getReferenceGenomeBytes()
```
required string reference_genome = 3;

Specified by:

getReferenceGenomeBytes in interface GenomicsDBExportConfiguration.ExportConfigurationOrBuilder

setReferenceGenome

public GenomicsDBExportConfiguration.ExportConfiguration.Builder setReferenceGenome(String value)

required string reference_genome = 3;

clearReferenceGenome

public GenomicsDBExportConfiguration.ExportConfiguration.Builder clearReferenceGenome()

required string reference_genome = 3;

setReferenceGenomeBytes

public GenomicsDBExportConfiguration.ExportConfiguration.Builder setReferenceGenomeBytes(com.google.protobuf.ByteString value)

required string reference_genome = 3;

ensureQueryColumnRangesIsMutable

private void ensureQueryColumnRangesIsMutable()

getQueryColumnRangesList
```
public List<GenomicsDBExportConfiguration.ColumnRangeList> getQueryColumnRangesList()
```
repeated .ColumnRangeList query_column_ranges = 4;

Specified by:

getQueryColumnRangesList in interface GenomicsDBExportConfiguration.ExportConfigurationOrBuilder

getQueryColumnRangesCount
```
public int getQueryColumnRangesCount()
```
repeated .ColumnRangeList query_column_ranges = 4;

Specified by:

getQueryColumnRangesCount in interface GenomicsDBExportConfiguration.ExportConfigurationOrBuilder

getQueryColumnRanges
```
public GenomicsDBExportConfiguration.ColumnRangeList getQueryColumnRanges(int index)
```
repeated .ColumnRangeList query_column_ranges = 4;

Specified by:

getQueryColumnRanges in interface GenomicsDBExportConfiguration.ExportConfigurationOrBuilder