GenomicsDBVidMapProto.VidMappingPB.Builder (com.intel:genomicsdb-gatk4 0.4.0 API)

java.lang.Object
- com.google.protobuf.AbstractMessageLite.Builder<BuilderType>
- - com.google.protobuf.AbstractMessage.Builder<BuilderType>
  - - com.google.protobuf.GeneratedMessage.Builder<GenomicsDBVidMapProto.VidMappingPB.Builder>
    - - com.intel.genomicsdb.GenomicsDBVidMapProto.VidMappingPB.Builder

All Implemented Interfaces:

com.google.protobuf.Message.Builder, com.google.protobuf.MessageLite.Builder, com.google.protobuf.MessageLiteOrBuilder, com.google.protobuf.MessageOrBuilder, GenomicsDBVidMapProto.VidMappingPBOrBuilder, Cloneable

Enclosing class:

GenomicsDBVidMapProto.VidMappingPB
```
public static final class GenomicsDBVidMapProto.VidMappingPB.Builder
extends com.google.protobuf.GeneratedMessage.Builder<GenomicsDBVidMapProto.VidMappingPB.Builder>
implements GenomicsDBVidMapProto.VidMappingPBOrBuilder
```
Protobuf type VidMappingPB

Field Summary

Fields
Modifier and Type	Field and Description
`private int`	`bitField0_`
`private List<GenomicsDBVidMapProto.Chromosome>`	`chromosomes_`
`private com.google.protobuf.RepeatedFieldBuilder<GenomicsDBVidMapProto.Chromosome,GenomicsDBVidMapProto.Chromosome.Builder,GenomicsDBVidMapProto.ChromosomeOrBuilder>`	`chromosomesBuilder_`
`private List<GenomicsDBVidMapProto.InfoField>`	`infofields_`
`private com.google.protobuf.RepeatedFieldBuilder<GenomicsDBVidMapProto.InfoField,GenomicsDBVidMapProto.InfoField.Builder,GenomicsDBVidMapProto.InfoFieldOrBuilder>`	`infofieldsBuilder_`

Constructor Summary

Constructors
Modifier Constructor and Description

private Builder()

private Builder(com.google.protobuf.GeneratedMessage.BuilderParent parent)

Constructors
Modifier	Constructor and Description
`private`	`Builder()`
`private`	`Builder(com.google.protobuf.GeneratedMessage.BuilderParent parent)`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`addAllChromosomes(Iterable<? extends GenomicsDBVidMapProto.Chromosome> values)` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`addAllInfofields(Iterable<? extends GenomicsDBVidMapProto.InfoField> values)` `repeated .InfoField infofields = 1;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`addChromosomes(GenomicsDBVidMapProto.Chromosome.Builder builderForValue)` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`addChromosomes(GenomicsDBVidMapProto.Chromosome value)` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`addChromosomes(int index, GenomicsDBVidMapProto.Chromosome.Builder builderForValue)` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`addChromosomes(int index, GenomicsDBVidMapProto.Chromosome value)` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.Chromosome.Builder`	`addChromosomesBuilder()` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.Chromosome.Builder`	`addChromosomesBuilder(int index)` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`addInfofields(GenomicsDBVidMapProto.InfoField.Builder builderForValue)` `repeated .InfoField infofields = 1;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`addInfofields(GenomicsDBVidMapProto.InfoField value)` `repeated .InfoField infofields = 1;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`addInfofields(int index, GenomicsDBVidMapProto.InfoField.Builder builderForValue)` `repeated .InfoField infofields = 1;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`addInfofields(int index, GenomicsDBVidMapProto.InfoField value)` `repeated .InfoField infofields = 1;`
`GenomicsDBVidMapProto.InfoField.Builder`	`addInfofieldsBuilder()` `repeated .InfoField infofields = 1;`
`GenomicsDBVidMapProto.InfoField.Builder`	`addInfofieldsBuilder(int index)` `repeated .InfoField infofields = 1;`
`GenomicsDBVidMapProto.VidMappingPB`	`build()`
`GenomicsDBVidMapProto.VidMappingPB`	`buildPartial()`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`clear()`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`clearChromosomes()` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`clearInfofields()` `repeated .InfoField infofields = 1;`
`private void`	`ensureChromosomesIsMutable()`
`private void`	`ensureInfofieldsIsMutable()`
`GenomicsDBVidMapProto.Chromosome`	`getChromosomes(int index)` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.Chromosome.Builder`	`getChromosomesBuilder(int index)` `repeated .Chromosome chromosomes = 2;`
`List<GenomicsDBVidMapProto.Chromosome.Builder>`	`getChromosomesBuilderList()` `repeated .Chromosome chromosomes = 2;`
`int`	`getChromosomesCount()` `repeated .Chromosome chromosomes = 2;`
`private com.google.protobuf.RepeatedFieldBuilder<GenomicsDBVidMapProto.Chromosome,GenomicsDBVidMapProto.Chromosome.Builder,GenomicsDBVidMapProto.ChromosomeOrBuilder>`	`getChromosomesFieldBuilder()`
`List<GenomicsDBVidMapProto.Chromosome>`	`getChromosomesList()` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.ChromosomeOrBuilder`	`getChromosomesOrBuilder(int index)` `repeated .Chromosome chromosomes = 2;`
`List<? extends GenomicsDBVidMapProto.ChromosomeOrBuilder>`	`getChromosomesOrBuilderList()` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.VidMappingPB`	`getDefaultInstanceForType()`
`static com.google.protobuf.Descriptors.Descriptor`	`getDescriptor()`
`com.google.protobuf.Descriptors.Descriptor`	`getDescriptorForType()`
`GenomicsDBVidMapProto.InfoField`	`getInfofields(int index)` `repeated .InfoField infofields = 1;`
`GenomicsDBVidMapProto.InfoField.Builder`	`getInfofieldsBuilder(int index)` `repeated .InfoField infofields = 1;`
`List<GenomicsDBVidMapProto.InfoField.Builder>`	`getInfofieldsBuilderList()` `repeated .InfoField infofields = 1;`
`int`	`getInfofieldsCount()` `repeated .InfoField infofields = 1;`
`private com.google.protobuf.RepeatedFieldBuilder<GenomicsDBVidMapProto.InfoField,GenomicsDBVidMapProto.InfoField.Builder,GenomicsDBVidMapProto.InfoFieldOrBuilder>`	`getInfofieldsFieldBuilder()`
`List<GenomicsDBVidMapProto.InfoField>`	`getInfofieldsList()` `repeated .InfoField infofields = 1;`
`GenomicsDBVidMapProto.InfoFieldOrBuilder`	`getInfofieldsOrBuilder(int index)` `repeated .InfoField infofields = 1;`
`List<? extends GenomicsDBVidMapProto.InfoFieldOrBuilder>`	`getInfofieldsOrBuilderList()` `repeated .InfoField infofields = 1;`
`protected com.google.protobuf.GeneratedMessage.FieldAccessorTable`	`internalGetFieldAccessorTable()`
`boolean`	`isInitialized()`
`private void`	`maybeForceBuilderInitialization()`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`mergeFrom(com.google.protobuf.CodedInputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`mergeFrom(GenomicsDBVidMapProto.VidMappingPB other)`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`mergeFrom(com.google.protobuf.Message other)`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`removeChromosomes(int index)` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`removeInfofields(int index)` `repeated .InfoField infofields = 1;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`setChromosomes(int index, GenomicsDBVidMapProto.Chromosome.Builder builderForValue)` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`setChromosomes(int index, GenomicsDBVidMapProto.Chromosome value)` `repeated .Chromosome chromosomes = 2;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`setInfofields(int index, GenomicsDBVidMapProto.InfoField.Builder builderForValue)` `repeated .InfoField infofields = 1;`
`GenomicsDBVidMapProto.VidMappingPB.Builder`	`setInfofields(int index, GenomicsDBVidMapProto.InfoField value)` `repeated .InfoField infofields = 1;`

Methods inherited from class com.google.protobuf.GeneratedMessage.Builder
addRepeatedField, clearField, clearOneof, clone, getAllFields, getField, getFieldBuilder, getOneofFieldDescriptor, getParentForChildren, getRepeatedField, getRepeatedFieldBuilder, getRepeatedFieldCount, getUnknownFields, hasField, hasOneof, internalGetMapField, internalGetMutableMapField, isClean, markClean, mergeUnknownFields, newBuilderForField, onBuilt, onChanged, parseUnknownField, setField, setRepeatedField, setUnknownFields

Methods inherited from class com.google.protobuf.AbstractMessage.Builder
findInitializationErrors, getInitializationErrorString, mergeDelimitedFrom, mergeDelimitedFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, mergeFrom, newUninitializedMessageException, toString

Methods inherited from class com.google.protobuf.AbstractMessageLite.Builder
addAll, newUninitializedMessageException

Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface com.google.protobuf.MessageOrBuilder
findInitializationErrors, getAllFields, getField, getInitializationErrorString, getOneofFieldDescriptor, getRepeatedField, getRepeatedFieldCount, getUnknownFields, hasField, hasOneof

Field Detail

bitField0_
```
private int bitField0_
```

infofields_

private List<GenomicsDBVidMapProto.InfoField> infofields_

infofieldsBuilder_

private com.google.protobuf.RepeatedFieldBuilder<GenomicsDBVidMapProto.InfoField,GenomicsDBVidMapProto.InfoField.Builder,GenomicsDBVidMapProto.InfoFieldOrBuilder> infofieldsBuilder_

chromosomes_

private List<GenomicsDBVidMapProto.Chromosome> chromosomes_

chromosomesBuilder_

private com.google.protobuf.RepeatedFieldBuilder<GenomicsDBVidMapProto.Chromosome,GenomicsDBVidMapProto.Chromosome.Builder,GenomicsDBVidMapProto.ChromosomeOrBuilder> chromosomesBuilder_

Constructor Detail

Builder
```
private Builder()
```

Builder

private Builder(com.google.protobuf.GeneratedMessage.BuilderParent parent)

Method Detail

getDescriptor

public static final com.google.protobuf.Descriptors.Descriptor getDescriptor()

internalGetFieldAccessorTable
```
protected com.google.protobuf.GeneratedMessage.FieldAccessorTable internalGetFieldAccessorTable()
```
Specified by:

internalGetFieldAccessorTable in class com.google.protobuf.GeneratedMessage.Builder<GenomicsDBVidMapProto.VidMappingPB.Builder>

maybeForceBuilderInitialization

private void maybeForceBuilderInitialization()

clear
```
public GenomicsDBVidMapProto.VidMappingPB.Builder clear()
```
Specified by:

clear in interface com.google.protobuf.Message.Builder

Specified by:

clear in interface com.google.protobuf.MessageLite.Builder

Overrides:

clear in class com.google.protobuf.GeneratedMessage.Builder<GenomicsDBVidMapProto.VidMappingPB.Builder>

getDescriptorForType
```
public com.google.protobuf.Descriptors.Descriptor getDescriptorForType()
```
Specified by:

getDescriptorForType in interface com.google.protobuf.Message.Builder

Specified by:

getDescriptorForType in interface com.google.protobuf.MessageOrBuilder

Overrides:

getDescriptorForType in class com.google.protobuf.GeneratedMessage.Builder<GenomicsDBVidMapProto.VidMappingPB.Builder>

getDefaultInstanceForType
```
public GenomicsDBVidMapProto.VidMappingPB getDefaultInstanceForType()
```
Specified by:

getDefaultInstanceForType in interface com.google.protobuf.MessageLiteOrBuilder

Specified by:

getDefaultInstanceForType in interface com.google.protobuf.MessageOrBuilder

build
```
public GenomicsDBVidMapProto.VidMappingPB build()
```
Specified by:

build in interface com.google.protobuf.Message.Builder

Specified by:

build in interface com.google.protobuf.MessageLite.Builder

buildPartial
```
public GenomicsDBVidMapProto.VidMappingPB buildPartial()
```
Specified by:

buildPartial in interface com.google.protobuf.Message.Builder

Specified by:

buildPartial in interface com.google.protobuf.MessageLite.Builder

mergeFrom
```
public GenomicsDBVidMapProto.VidMappingPB.Builder mergeFrom(com.google.protobuf.Message other)
```
Specified by:

mergeFrom in interface com.google.protobuf.Message.Builder

Overrides:

mergeFrom in class com.google.protobuf.AbstractMessage.Builder<GenomicsDBVidMapProto.VidMappingPB.Builder>

mergeFrom

public GenomicsDBVidMapProto.VidMappingPB.Builder mergeFrom(GenomicsDBVidMapProto.VidMappingPB other)

isInitialized
```
public final boolean isInitialized()
```
Specified by:

isInitialized in interface com.google.protobuf.MessageLiteOrBuilder

Overrides:

isInitialized in class com.google.protobuf.GeneratedMessage.Builder<GenomicsDBVidMapProto.VidMappingPB.Builder>

mergeFrom

public GenomicsDBVidMapProto.VidMappingPB.Builder mergeFrom(com.google.protobuf.CodedInputStream input,
                                                            com.google.protobuf.ExtensionRegistryLite extensionRegistry)
                                                     throws IOException

Specified by:: mergeFrom in interface com.google.protobuf.Message.Builder
Specified by:: mergeFrom in interface com.google.protobuf.MessageLite.Builder
Overrides:: mergeFrom in class com.google.protobuf.AbstractMessage.Builder<GenomicsDBVidMapProto.VidMappingPB.Builder>
Throws:: IOException

ensureInfofieldsIsMutable

private void ensureInfofieldsIsMutable()

getInfofieldsList
```
public List<GenomicsDBVidMapProto.InfoField> getInfofieldsList()
```
repeated .InfoField infofields = 1;

Specified by:

getInfofieldsList in interface GenomicsDBVidMapProto.VidMappingPBOrBuilder

getInfofieldsCount
```
public int getInfofieldsCount()
```
repeated .InfoField infofields = 1;

Specified by:

getInfofieldsCount in interface GenomicsDBVidMapProto.VidMappingPBOrBuilder

getInfofields
```
public GenomicsDBVidMapProto.InfoField getInfofields(int index)
```
repeated .InfoField infofields = 1;

Specified by:

getInfofields in interface GenomicsDBVidMapProto.VidMappingPBOrBuilder