Uses of Class
com.intel.genomicsdb.GenomicsDBImportConfiguration.ImportConfiguration.Builder

Uses of GenomicsDBImportConfiguration.ImportConfiguration.Builder in com.intel.genomicsdb

Methods in com.intel.genomicsdb that return GenomicsDBImportConfiguration.ImportConfiguration.Builder

Modifier and Type	Method and Description
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.addAllColumnPartitions(Iterable<? extends GenomicsDBImportConfiguration.Partition> values) repeated .Partition column_partitions = 4;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.addColumnPartitions(GenomicsDBImportConfiguration.Partition.Builder builderForValue) repeated .Partition column_partitions = 4;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.addColumnPartitions(GenomicsDBImportConfiguration.Partition value) repeated .Partition column_partitions = 4;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.addColumnPartitions(int index, GenomicsDBImportConfiguration.Partition.Builder builderForValue) repeated .Partition column_partitions = 4;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.addColumnPartitions(int index, GenomicsDBImportConfiguration.Partition value) repeated .Partition column_partitions = 4;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clear()
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearCallsetMappingFile() optional string callset_mapping_file = 6;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearColumnPartitions() repeated .Partition column_partitions = 4;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearCompressTiledbArray() optional bool compress_tiledb_array = 15 [default = true];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearDeleteAndCreateTiledbArray() optional bool delete_and_create_tiledb_array = 10 [default = false];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearDiscardVcfIndex() optional bool discard_vcf_index = 13 [default = true];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearDoPingPongBuffering() optional bool do_ping_pong_buffering = 11 [default = true];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearNumCellsPerTile() optional int64 num_cells_per_tile = 16 [default = 1000];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearNumParallelVcfFiles() optional int32 num_parallel_vcf_files = 9 [default = 1];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearOffloadVcfOutputProcessing() optional bool offload_vcf_output_processing = 12 [default = true];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearProduceCombinedVcf() optional bool produce_combined_vcf = 2 [default = false];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearProduceTiledbArray() optional bool produce_tiledb_array = 3 [default = true];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearRowBasedPartitioning() optional bool row_based_partitioning = 1 [default = false];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearSegmentSize() optional int64 segment_size = 14 [default = 10485760];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearSizePerColumnPartition() required int64 size_per_column_partition = 7 [default = 10240];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearTreatDeletionsAsIntervals() optional bool treat_deletions_as_intervals = 8 [default = true];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.clearVidMappingFile() optional string vid_mapping_file = 5;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.mergeFrom(com.google.protobuf.CodedInputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.mergeFrom(GenomicsDBImportConfiguration.ImportConfiguration other)
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.mergeFrom(com.google.protobuf.Message other)
static GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.newBuilder()
static GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.newBuilder(GenomicsDBImportConfiguration.ImportConfiguration prototype)
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.newBuilderForType()
protected GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.newBuilderForType(com.google.protobuf.GeneratedMessage.BuilderParent parent)
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.removeColumnPartitions(int index) repeated .Partition column_partitions = 4;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setCallsetMappingFile(String value) optional string callset_mapping_file = 6;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setCallsetMappingFileBytes(com.google.protobuf.ByteString value) optional string callset_mapping_file = 6;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setColumnPartitions(int index, GenomicsDBImportConfiguration.Partition.Builder builderForValue) repeated .Partition column_partitions = 4;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setColumnPartitions(int index, GenomicsDBImportConfiguration.Partition value) repeated .Partition column_partitions = 4;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setCompressTiledbArray(boolean value) optional bool compress_tiledb_array = 15 [default = true];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setDeleteAndCreateTiledbArray(boolean value) optional bool delete_and_create_tiledb_array = 10 [default = false];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setDiscardVcfIndex(boolean value) optional bool discard_vcf_index = 13 [default = true];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setDoPingPongBuffering(boolean value) optional bool do_ping_pong_buffering = 11 [default = true];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setNumCellsPerTile(long value) optional int64 num_cells_per_tile = 16 [default = 1000];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setNumParallelVcfFiles(int value) optional int32 num_parallel_vcf_files = 9 [default = 1];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setOffloadVcfOutputProcessing(boolean value) optional bool offload_vcf_output_processing = 12 [default = true];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setProduceCombinedVcf(boolean value) optional bool produce_combined_vcf = 2 [default = false];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setProduceTiledbArray(boolean value) optional bool produce_tiledb_array = 3 [default = true];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setRowBasedPartitioning(boolean value) optional bool row_based_partitioning = 1 [default = false];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setSegmentSize(long value) optional int64 segment_size = 14 [default = 10485760];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setSizePerColumnPartition(long value) required int64 size_per_column_partition = 7 [default = 10240];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setTreatDeletionsAsIntervals(boolean value) optional bool treat_deletions_as_intervals = 8 [default = true];
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setVidMappingFile(String value) optional string vid_mapping_file = 5;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.Builder.setVidMappingFileBytes(com.google.protobuf.ByteString value) optional string vid_mapping_file = 5;
GenomicsDBImportConfiguration.ImportConfiguration.Builder	GenomicsDBImportConfiguration.ImportConfiguration.toBuilder()