Uses of Class
com.intel.genomicsdb.GenomicsDBVidMapProto.VidMappingPB

Uses of GenomicsDBVidMapProto.VidMappingPB in com.intel.genomicsdb

Fields in com.intel.genomicsdb declared as GenomicsDBVidMapProto.VidMappingPB

Modifier and Type	Field and Description
private static GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.DEFAULT_INSTANCE
private GenomicsDBVidMapProto.VidMappingPB	GenomicsDBImporter.mVidMap

Fields in com.intel.genomicsdb with type parameters of type GenomicsDBVidMapProto.VidMappingPB

Modifier and Type	Field and Description
static com.google.protobuf.Parser<GenomicsDBVidMapProto.VidMappingPB>	GenomicsDBVidMapProto.VidMappingPB.PARSER Deprecated.

Methods in com.intel.genomicsdb that return GenomicsDBVidMapProto.VidMappingPB

Modifier and Type	Method and Description
GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.Builder.build()
GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.Builder.buildPartial()
private GenomicsDBVidMapProto.VidMappingPB	GenomicsDBImporter.generateVidMapFromMergedHeader(Set<htsjdk.variant.vcf.VCFHeaderLine> mergedHeader) Generate the ProtoBuf data structure for vid mapping Also remember, contigs are 1-based which means TileDB column offsets should start from 1
static GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.getDefaultInstance()
GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.getDefaultInstanceForType()
GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.Builder.getDefaultInstanceForType()
static GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.parseDelimitedFrom(InputStream input)
static GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.parseDelimitedFrom(InputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
static GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.parseFrom(byte[] data)
static GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.parseFrom(byte[] data, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
static GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.parseFrom(com.google.protobuf.ByteString data)
static GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.parseFrom(com.google.protobuf.ByteString data, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
static GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.parseFrom(com.google.protobuf.CodedInputStream input)
static GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.parseFrom(com.google.protobuf.CodedInputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)
static GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.parseFrom(InputStream input)
static GenomicsDBVidMapProto.VidMappingPB	GenomicsDBVidMapProto.VidMappingPB.parseFrom(InputStream input, com.google.protobuf.ExtensionRegistryLite extensionRegistry)

Methods in com.intel.genomicsdb that return types with arguments of type GenomicsDBVidMapProto.VidMappingPB

Modifier and Type	Method and Description
com.google.protobuf.Parser<GenomicsDBVidMapProto.VidMappingPB>	GenomicsDBVidMapProto.VidMappingPB.getParserForType()
static com.google.protobuf.Parser<GenomicsDBVidMapProto.VidMappingPB>	GenomicsDBVidMapProto.VidMappingPB.parser()

Methods in com.intel.genomicsdb with parameters of type GenomicsDBVidMapProto.VidMappingPB

Modifier and Type	Method and Description
GenomicsDBVidMapProto.VidMappingPB.Builder	GenomicsDBVidMapProto.VidMappingPB.Builder.mergeFrom(GenomicsDBVidMapProto.VidMappingPB other)
static GenomicsDBVidMapProto.VidMappingPB.Builder	GenomicsDBVidMapProto.VidMappingPB.newBuilder(GenomicsDBVidMapProto.VidMappingPB prototype)