com.milaboratory.core

Class Target

java.lang.Object

com.milaboratory.core.Target

public final class Target
extends Object

Field Summary

Fields

Modifier and Type	Field and Description
NSequenceWithQuality[]	targets

Method Summary

Methods

Modifier and Type	Method and Description
byte	getFullSourceId(int targetId)
boolean	getRCStateOfTarget(int targetId) true for RC, false for Direct
int	getReadIdOfTarget(int targetId)
int	numberOfParts() 1 for SingleRead input or 2 for PairedRead input

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

targets

public final NSequenceWithQuality[] targets

Method Detail

numberOfParts

public int numberOfParts()

1 for SingleRead input or 2 for PairedRead input

getReadIdOfTarget

public int getReadIdOfTarget(int targetId)

Parameters:

targetId - 0 or 1

Returns:

0 for R1, 1 for R2

getRCStateOfTarget

public boolean getRCStateOfTarget(int targetId)

true for RC, false for Direct

Parameters:

targetId - 0 or 1

Returns:

true for RC, false for Direct

getFullSourceId

public byte getFullSourceId(int targetId)