com.milaboratory.core.alignment

Class AffineGapAlignmentScoring.SerializationObject

java.lang.Object

com.milaboratory.core.alignment.AffineGapAlignmentScoring.SerializationObject

All Implemented Interfaces:

Serializable

Enclosing class:

AffineGapAlignmentScoring<S extends Sequence<S>>

protected static class AffineGapAlignmentScoring.SerializationObject
extends Object
implements Serializable

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor and Description
AffineGapAlignmentScoring.SerializationObject()
AffineGapAlignmentScoring.SerializationObject(Alphabet alphabet, com.milaboratory.core.alignment.SubstitutionMatrix matrix, int gapOpenPenalty, int gapExtensionPenalty)

Method Summary

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AffineGapAlignmentScoring.SerializationObject

public AffineGapAlignmentScoring.SerializationObject()

AffineGapAlignmentScoring.SerializationObject

public AffineGapAlignmentScoring.SerializationObject(Alphabet alphabet,
                                             com.milaboratory.core.alignment.SubstitutionMatrix matrix,
                                             int gapOpenPenalty,
                                             int gapExtensionPenalty)