com.milaboratory.core.alignment

Class AlignmentCache

java.lang.Object

com.milaboratory.core.alignment.AlignmentCache

public final class AlignmentCache
extends Object

AlignmentCache - class which is providing cached array for BandedLinearAligner.

This cache helps to avoid creating new alignment array every time banded alignment is performed.

Method Summary

Methods

Modifier and Type	Method and Description
static void	enable() Enables CachedArray system
static CachedIntArray	get() Returns available CachedIntArray if AlignemntCache is on or creates new CachedIntArray otherwise
static void	release() Release CacheIntArray

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

enable

public static void enable()

Enables CachedArray system

get

public static CachedIntArray get()

Returns available CachedIntArray if AlignemntCache is on or creates new CachedIntArray otherwise

Returns:

CachedIntArray

release

public static void release()

Release CacheIntArray