Uses of Interface
com.milaboratory.core.alignment.batch.BatchAlignerWithBaseParameters

Packages that use BatchAlignerWithBaseParameters

Package	Description
com.milaboratory.core.alignment.batch
com.milaboratory.core.alignment.benchmark
com.milaboratory.core.alignment.kaligner1
com.milaboratory.core.alignment.kaligner2

Uses of BatchAlignerWithBaseParameters in com.milaboratory.core.alignment.batch

Methods in com.milaboratory.core.alignment.batch that return BatchAlignerWithBaseParameters

Modifier and Type	Method and Description
BatchAlignerWithBaseParameters	BatchAlignerWithBaseParameters.clone()

Uses of BatchAlignerWithBaseParameters in com.milaboratory.core.alignment.benchmark

Classes in com.milaboratory.core.alignment.benchmark with type parameters of type BatchAlignerWithBaseParameters

Modifier and Type	Class and Description
class	Benchmark<T extends BatchAlignerWithBaseParameters>
class	BenchmarkInput<T extends BatchAlignerWithBaseParameters> Created by dbolotin on 27/10/15.

Fields in com.milaboratory.core.alignment.benchmark declared as BatchAlignerWithBaseParameters

Modifier and Type	Field and Description
T	BenchmarkInput.params

Uses of BatchAlignerWithBaseParameters in com.milaboratory.core.alignment.kaligner1

Subinterfaces of BatchAlignerWithBaseParameters in com.milaboratory.core.alignment.kaligner1

Modifier and Type	Interface and Description
interface	AbstractKAlignerParameters

Classes in com.milaboratory.core.alignment.kaligner1 that implement BatchAlignerWithBaseParameters

Modifier and Type	Class and Description
class	KAlignerParameters

Uses of BatchAlignerWithBaseParameters in com.milaboratory.core.alignment.kaligner2

Classes in com.milaboratory.core.alignment.kaligner2 that implement BatchAlignerWithBaseParameters

Modifier and Type	Class and Description
class	KAlignerParameters2