Uses of Class
com.milaboratory.core.alignment.blast.BlastDB

Packages that use BlastDB

Package	Description
com.milaboratory.core.alignment.blast

Uses of BlastDB in com.milaboratory.core.alignment.blast

Methods in com.milaboratory.core.alignment.blast that return BlastDB

Modifier and Type	Method and Description
static <S extends Sequence<S>> BlastDB	BlastDBBuilder.build(List<S> sequences)
static <S extends Sequence<S>> BlastDB	BlastDBBuilder.build(List<S> sequences, boolean buildIdIndex)
static <S extends Sequence<S>> BlastDB<S>	BlastDB.get(String name)

Constructors in com.milaboratory.core.alignment.blast with parameters of type BlastDB

Constructor and Description
AABlastAlignerExt(BlastDB database)
AABlastAlignerExt(BlastDB database, BlastAlignerParameters parameters)
BlastAlignerExt(BlastDB database)
BlastAlignerExt(BlastDB database, BlastAlignerParameters parameters)
BlastAlignerExtAbstract(BlastDB database)
BlastAlignerExtAbstract(BlastDB database, BlastAlignerParameters parameters)
NBlastAlignerExt(BlastDB database)
NBlastAlignerExt(BlastDB database, BlastAlignerParameters parameters)