Hierarchy For Package com.milaboratory.core.alignment.blast

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • com.milaboratory.core.alignment.batch.AlignmentHitImpl<S,P> (implements com.milaboratory.core.alignment.batch.AlignmentHit<S,P>)
    • com.milaboratory.core.alignment.blast.BlastHit<S,P>
      • com.milaboratory.core.alignment.blast.AABlastHit<P>
      • com.milaboratory.core.alignment.blast.BlastHitExt<S>
        • com.milaboratory.core.alignment.blast.AABlastHitExt
        • com.milaboratory.core.alignment.blast.NBlastHitExt
      • com.milaboratory.core.alignment.blast.NBlastHit<P>
  • com.milaboratory.core.alignment.blast.Blast
  • com.milaboratory.core.alignment.blast.BlastAlignerAbstract<S,P,H> (implements com.milaboratory.core.alignment.batch.PipedBatchAlignerWithBase<S,P,H>)
    • com.milaboratory.core.alignment.blast.AABlastAligner<P>
    • com.milaboratory.core.alignment.blast.BlastAligner<S,P>
    • com.milaboratory.core.alignment.blast.NBlastAligner<P>
  • com.milaboratory.core.alignment.blast.BlastAlignerExtAbstract<S,H> (implements com.milaboratory.core.alignment.batch.PipedBatchAligner<S,H>)
    • com.milaboratory.core.alignment.blast.AABlastAlignerExt
    • com.milaboratory.core.alignment.blast.BlastAlignerExt<S>
    • com.milaboratory.core.alignment.blast.NBlastAlignerExt
  • com.milaboratory.core.alignment.blast.BlastAlignerParameters
  • com.milaboratory.core.alignment.blast.BlastDB<S>
  • com.milaboratory.core.alignment.blast.BlastDBBuilder

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • com.milaboratory.core.alignment.blast.BlastTask
    • com.milaboratory.core.alignment.blast.BlastStrand