Uses of Class
com.milaboratory.core.alignment.kaligner2.KMappingHit2

Packages that use KMappingHit2

Package	Description
com.milaboratory.core.alignment.kaligner2

Uses of KMappingHit2 in com.milaboratory.core.alignment.kaligner2

Methods in com.milaboratory.core.alignment.kaligner2 that return KMappingHit2

Modifier and Type	Method and Description
KMappingHit2	KMapper2.calculateHit(int id, IntArrayList data, IntArrayList seedPositions) Array list wrapper for KMapper2.calculateHit(int, int[], int, int, IntArrayList).
KMappingHit2	KAlignmentHit2.getMappingHit()

Methods in com.milaboratory.core.alignment.kaligner2 that return types with arguments of type KMappingHit2

Modifier and Type	Method and Description
List<KMappingHit2>	KMappingResult2.getHits()

Constructor parameters in com.milaboratory.core.alignment.kaligner2 with type arguments of type KMappingHit2

Constructor and Description
KMappingResult2(IntArrayList seeds, List<KMappingHit2> hits) Creates new KMappingResult