| Class | Description |
|---|---|
| KAligner2<P> | |
| KAligner2Statistics | |
| KAligner2Statistics.State | |
| KAlignerParameters2 | |
| KAlignmentHit2<P> | |
| KAlignmentResult2<P> |
Created by dbolotin on 26/10/15.
|
| KMapper2 |
KMapper - class to perform fast alignment based only on matches between kMers of target and one of reference
sequences.
|
| KMappingHit2 |
KMappingHit - class which represents single hit for
KMappingResult2 |
| KMappingResult2 |
KMappingResult - class which is result of
KMapper#align(com.milaboratory.core.sequence.nucleotide.NucleotideSequence,
int, int), KMapper.align(com.milaboratory.core.sequence.NucleotideSequence)
methods. |
| OffsetPacksAccumulator |
| Enum | Description |
|---|---|
| KAligner2Statistics.ClusterTrimmingType |
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