Hierarchy For Package com.milaboratory.core.alignment.kaligner2

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • com.milaboratory.core.alignment.kaligner2.KAligner2<P> (implements com.milaboratory.core.alignment.batch.BatchAlignerWithBaseWithFilter<S,P,H>)
  • com.milaboratory.core.alignment.kaligner2.KAligner2Statistics
  • com.milaboratory.core.alignment.kaligner2.KAligner2Statistics.State
  • com.milaboratory.core.alignment.kaligner2.KAlignerParameters2 (implements com.milaboratory.core.alignment.kaligner1.AbstractKAlignerParameters, java.lang.Cloneable, java.io.Serializable)
  • com.milaboratory.core.alignment.kaligner2.KAlignmentHit2<P> (implements com.milaboratory.core.alignment.batch.AlignmentHit<S,P>)
  • com.milaboratory.core.alignment.kaligner2.KAlignmentResult2<P> (implements com.milaboratory.core.alignment.batch.AlignmentResult<H>)
  • com.milaboratory.core.alignment.kaligner2.KMapper2 (implements java.io.Serializable)
  • com.milaboratory.core.alignment.kaligner2.KMappingHit2 (implements java.io.Serializable)
  • com.milaboratory.core.alignment.kaligner2.KMappingResult2 (implements java.io.Serializable)
  • com.milaboratory.core.alignment.kaligner2.OffsetPacksAccumulator

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • com.milaboratory.core.alignment.kaligner2.KAligner2Statistics.ClusterTrimmingType