Uses of Package
com.milaboratory.core.alignment.kaligner2

Packages that use com.milaboratory.core.alignment.kaligner2

Package	Description
com.milaboratory.core.alignment.benchmark
com.milaboratory.core.alignment.kaligner2

Classes in com.milaboratory.core.alignment.kaligner2 used by com.milaboratory.core.alignment.benchmark

Class and Description
KAligner2Statistics

Classes in com.milaboratory.core.alignment.kaligner2 used by com.milaboratory.core.alignment.kaligner2

Class and Description
KAligner2
KAligner2Statistics
KAligner2Statistics.ClusterTrimmingType
KAlignerParameters2
KAlignmentHit2
KAlignmentResult2 Created by dbolotin on 26/10/15.
KMapper2 KMapper - class to perform fast alignment based only on matches between kMers of target and one of reference sequences.
KMappingHit2 KMappingHit - class which represents single hit for KMappingResult2
KMappingResult2 KMappingResult - class which is result of KMapper#align(com.milaboratory.core.sequence.nucleotide.NucleotideSequence, int, int), KMapper.align(com.milaboratory.core.sequence.NucleotideSequence) methods.