com.milaboratory.core.io.sequence

Class PairedReader

java.lang.Object

com.milaboratory.core.io.sequence.AbstractSequenceReader<R>

com.milaboratory.core.io.sequence.AbstractMultiReader<PairedRead>

com.milaboratory.core.io.sequence.PairedReader

All Implemented Interfaces:

cc.redberry.pipe.OutputPort<PairedRead>, cc.redberry.pipe.OutputPortCloseable<PairedRead>, SequenceReader<PairedRead>, SequenceReaderCloseable<PairedRead>, CanReportProgress, AutoCloseable

Direct Known Subclasses:

PairedFastqReader

public class PairedReader
extends AbstractMultiReader<PairedRead>

Created by dbolotin on 23/06/14.

Field Summary

Fields inherited from class com.milaboratory.core.io.sequence.AbstractSequenceReader

readsCounter

Constructor Summary

Constructors

Constructor and Description
PairedReader(SingleReader... readers)

Method Summary

Methods

Modifier and Type	Method and Description
PairedRead	take()

Methods inherited from class com.milaboratory.core.io.sequence.AbstractMultiReader

close, getProgress, isFinished, takeReads

Methods inherited from class com.milaboratory.core.io.sequence.AbstractSequenceReader

addOneRead, getNumberOfReads

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface com.milaboratory.core.io.sequence.SequenceReader

getNumberOfReads

Constructor Detail

PairedReader

public PairedReader(SingleReader... readers)

Method Detail

take

public PairedRead take()