com.milaboratory.core.io.sequence

Interface SingleReader

All Superinterfaces:

AutoCloseable, cc.redberry.pipe.OutputPort<SingleRead>, cc.redberry.pipe.OutputPortCloseable<SingleRead>, SequenceReader<SingleRead>, SequenceReaderCloseable<SingleRead>

All Known Implementing Classes:

FastaSequenceReaderWrapper, RandomAccessFastqReader, SingleFastqIndexer, SingleFastqReader

public interface SingleReader
extends SequenceReaderCloseable<SingleRead>

Author:

Dmitry Bolotin, Stanislav Poslavsky

Method Summary

Methods inherited from interface com.milaboratory.core.io.sequence.SequenceReader

getNumberOfReads

Methods inherited from interface cc.redberry.pipe.OutputPortCloseable

close

Methods inherited from interface cc.redberry.pipe.OutputPort

take