Uses of Interface
com.milaboratory.core.io.sequence.SequenceReader

Packages that use SequenceReader

Package	Description
com.milaboratory.core.io.sequence
com.milaboratory.core.io.sequence.fasta
com.milaboratory.core.io.sequence.fastq

Uses of SequenceReader in com.milaboratory.core.io.sequence

Subinterfaces of SequenceReader in com.milaboratory.core.io.sequence

Modifier and Type	Interface and Description
interface	SequenceReaderCloseable<S extends SequenceRead> Created by dbolotin on 18/07/14.
interface	SingleReader

Classes in com.milaboratory.core.io.sequence that implement SequenceReader

Modifier and Type	Class and Description
class	AbstractMultiReader<R extends SequenceRead> Created by dbolotin on 23/06/14.
class	AbstractSequenceReader<R extends SequenceRead>
class	MultiReader
class	PairedReader Created by dbolotin on 23/06/14.

Uses of SequenceReader in com.milaboratory.core.io.sequence.fasta

Classes in com.milaboratory.core.io.sequence.fasta that implement SequenceReader

Modifier and Type	Class and Description
class	FastaSequenceReaderWrapper Converts FastaReader<NucleotideSequence> to SingleReader.

Uses of SequenceReader in com.milaboratory.core.io.sequence.fastq

Classes in com.milaboratory.core.io.sequence.fastq that implement SequenceReader

Modifier and Type	Class and Description
class	PairedFastqReader Created by dbolotin on 23/06/14.
class	RandomAccessFastqReader FASTQ file reader with random access.
class	RandomAccessPairedFastqReader FASTQ file reader for paired reads with random access.
class	SingleFastqIndexer
class	SingleFastqReader