Hierarchy For Package com.milaboratory.core.io.sequence.fasta

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • com.milaboratory.core.io.sequence.fasta.FastaReader<S> (implements java.lang.AutoCloseable, com.milaboratory.util.CanReportProgress, cc.redberry.pipe.OutputPortCloseable<T>)
  • com.milaboratory.core.io.sequence.fasta.FastaReader.RawFastaRecord
  • com.milaboratory.core.io.sequence.fasta.FastaRecord<S>
  • com.milaboratory.core.io.sequence.fasta.FastaSequenceReaderWrapper (implements com.milaboratory.util.CanReportProgress, com.milaboratory.core.io.sequence.SingleReader)
  • com.milaboratory.core.io.sequence.fasta.FastaSequenceWriterWrapper (implements com.milaboratory.core.io.sequence.SingleSequenceWriter)
  • com.milaboratory.core.io.sequence.fasta.FastaWriter<S> (implements java.lang.AutoCloseable)
  • com.milaboratory.core.io.sequence.fasta.RandomAccessFastaIndex
  • com.milaboratory.core.io.sequence.fasta.RandomAccessFastaIndex.IndexBuilder
  • com.milaboratory.core.io.sequence.fasta.RandomAccessFastaIndex.IndexRecord
  • com.milaboratory.core.io.sequence.fasta.RandomAccessFastaIndex.StreamIndexBuilder
  • com.milaboratory.core.io.sequence.fasta.RandomAccessFastaReader<S> (implements java.lang.AutoCloseable)
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • java.lang.RuntimeException
        • com.milaboratory.core.io.sequence.fasta.RandomAccessFastaIndex.MultipleMatchingRecordsException
        • com.milaboratory.core.io.sequence.fasta.RandomAccessFastaIndex.NoSuchRecordException