| Interface | Description |
|---|---|
| PairedSequenceWriter | |
| SequenceRead | |
| SequenceReader<S extends SequenceRead> |
If this reader has some system resources associated with it (like opened file or network streams) implement
OutputPortCloseable interface along with this interface. |
| SequenceReaderCloseable<S extends SequenceRead> |
Created by dbolotin on 18/07/14.
|
| SequenceWriter<R extends SequenceRead> |
Common class for sequence writers.
|
| SingleRead |
Single read
|
| SingleReader | |
| SingleSequenceWriter |
| Class | Description |
|---|---|
| AbstractMultiReader<R extends SequenceRead> |
Created by dbolotin on 23/06/14.
|
| AbstractSequenceReader<R extends SequenceRead> | |
| MultiRead | |
| MultiReader | |
| PairedRead | |
| PairedReader |
Created by dbolotin on 23/06/14.
|
| SequenceReadUtil | |
| SingleReadImpl | |
| SingleReadLazy |
| Exception | Description |
|---|---|
| IllegalFileFormatException |
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