com.milaboratory.core.mutations

Class MutationsCounter

java.lang.Object

com.milaboratory.core.mutations.MutationsCounter

public final class MutationsCounter
extends Object

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static interface	MutationsCounter.Filter

Constructor Summary

Constructors

Constructor and Description
MutationsCounter()

Method Summary

Methods

Modifier and Type	Method and Description
void	adjust(Mutations<?> mutations, int delta)
void	adjust(Mutations<?> mutations, MutationsEnumerator enumerator, int delta)
<S extends Sequence<S>> Mutations<S>	build(Alphabet<S> alphabet, MutationsCounter.Filter filter)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MutationsCounter

public MutationsCounter()

Method Detail

adjust

public void adjust(Mutations<?> mutations,
          int delta)

adjust

public void adjust(Mutations<?> mutations,
          MutationsEnumerator enumerator,
          int delta)

build

public <S extends Sequence<S>> Mutations<S> build(Alphabet<S> alphabet,
                                         MutationsCounter.Filter filter)