com.milaboratory.core.mutations.generator

Interface NucleotideMutationModel

All Superinterfaces:

Serializable

All Known Implementing Classes:

GenericNucleotideMutationModel

public interface NucleotideMutationModel
extends Serializable

Method Summary

Methods

Modifier and Type	Method and Description
NucleotideMutationModel	clone() Clones only parameters, the state is generated randomly.
int	generateMutation(int position, int inputLetter)
NucleotideMutationModel	multiplyProbabilities(double factor)
void	reseed(long seed)

Method Detail

reseed

void reseed(long seed)

generateMutation

int generateMutation(int position,
                   int inputLetter)

multiplyProbabilities

NucleotideMutationModel multiplyProbabilities(double factor)

clone

NucleotideMutationModel clone()

Clones only parameters, the state is generated randomly. Use reseed(long) to obtain the same sequence of mutations.

Returns:

copy of this mutation model