com.milaboratory.core.mutations.generator

Class SubstitutionModelBuilder

java.lang.Object

com.milaboratory.core.mutations.generator.SubstitutionModelBuilder

public final class SubstitutionModelBuilder
extends Object

Constructor Summary

Constructors

Constructor and Description
SubstitutionModelBuilder(Alphabet alphabet)
SubstitutionModelBuilder(int letters)

Method Summary

Methods

Modifier and Type	Method and Description
SubstitutionModel	build()
double	getProbability(int fromLetter, int toLetter)
void	setProbability(int from, int to, double value)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SubstitutionModelBuilder

public SubstitutionModelBuilder(Alphabet alphabet)

SubstitutionModelBuilder

public SubstitutionModelBuilder(int letters)

Method Detail

setProbability

public void setProbability(int from,
                  int to,
                  double value)

build

public SubstitutionModel build()

getProbability

public double getProbability(int fromLetter,
                    int toLetter)