com.milaboratory.core.sequence

Class AbstractSeq<S extends AbstractSeq<S>>

java.lang.Object

com.milaboratory.core.sequence.AbstractSeq<S>

All Implemented Interfaces:

Seq<S>

Direct Known Subclasses:

Sequence, SequenceQuality

public abstract class AbstractSeq<S extends AbstractSeq<S>>
extends Object
implements Seq<S>

Constructor Summary

Constructors

Constructor and Description
AbstractSeq()

Method Summary

Methods

Modifier and Type	Method and Description
S	concatenate(S other) Returns a concatenation of this and other sequence (so this will be followed by other in the result).
S	getRange(Range range) Returns a subsequence of this bounded by specified range.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface com.milaboratory.core.sequence.Seq

getBuilder, getRange, size

Constructor Detail

AbstractSeq

public AbstractSeq()

Method Detail

getRange

public S getRange(Range range)

Description copied from interface: Seq

Returns a subsequence of this bounded by specified range.

Specified by:

getRange in interface Seq<S extends AbstractSeq<S>>

Parameters:

range - a range that defines starting (inclusive) and ending (exclusive) points of subsequence

Returns:

subsequence of this bounded by specified range.

concatenate

public S concatenate(S other)

Description copied from interface: Seq

Returns a concatenation of this and other sequence (so this will be followed by other in the result).

Specified by:

concatenate in interface Seq<S extends AbstractSeq<S>>

Parameters:

other - other sequence

Returns:

concatenation of this and other sequences