com.milaboratory.core.sequence

Class NSequenceWithQualityBuilder

java.lang.Object

com.milaboratory.core.sequence.NSequenceWithQualityBuilder

All Implemented Interfaces:

SeqBuilder<NSequenceWithQuality>

public class NSequenceWithQualityBuilder
extends Object
implements SeqBuilder<NSequenceWithQuality>

Created by poslavsky on 10/07/14.

Constructor Summary

Constructors

Constructor and Description
NSequenceWithQualityBuilder()

Method Summary

Methods

Modifier and Type	Method and Description
NSequenceWithQualityBuilder	append(NSequenceWithQuality seq) Appends seq.
NSequenceWithQualityBuilder	clone() Returns a deep copy of this builder
NSequenceWithQuality	createAndDestroy() Creates the sequence and destroys this builder.
NSequenceWithQualityBuilder	ensureCapacity(int capacity) Ensures capacity of this builder.
int	size() Size of sequence being created.

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

NSequenceWithQualityBuilder

public NSequenceWithQualityBuilder()

Method Detail

size

public int size()

Description copied from interface: SeqBuilder

Size of sequence being created.

Specified by:

size in interface SeqBuilder<NSequenceWithQuality>

Returns:

size

ensureCapacity

public NSequenceWithQualityBuilder ensureCapacity(int capacity)

Description copied from interface: SeqBuilder

Ensures capacity of this builder.

Specified by:

ensureCapacity in interface SeqBuilder<NSequenceWithQuality>

Parameters:

capacity - capacity

Returns:

this

createAndDestroy

public NSequenceWithQuality createAndDestroy()

Description copied from interface: SeqBuilder

Creates the sequence and destroys this builder.

Specified by:

createAndDestroy in interface SeqBuilder<NSequenceWithQuality>

Returns:

created sequence

append

public NSequenceWithQualityBuilder append(NSequenceWithQuality seq)

Description copied from interface: SeqBuilder

Appends seq.

Specified by:

append in interface SeqBuilder<NSequenceWithQuality>

Parameters:

seq - seq

Returns:

this

clone

public NSequenceWithQualityBuilder clone()

Description copied from interface: SeqBuilder

Returns a deep copy of this builder

Specified by:

clone in interface SeqBuilder<NSequenceWithQuality>

Overrides:

clone in class Object

Returns:

a deep copy of this builder