com.milaboratory.core.sequence

Interface SeqBuilder<S extends Seq<S>>

All Known Subinterfaces:

SequenceBuilder<S>

All Known Implementing Classes:

ArraySeqBuilder, NSequenceWithQualityBuilder, SequenceQualityBuilder

public interface SeqBuilder<S extends Seq<S>>

Interface for classes that build seq objects.

Author:

Bolotin Dmitriy (bolotin.dmitriy@gmail.com), Poslavsky Stanislav (stvlpos@mail.ru), Shugay Mikhail (mikhail.shugay@gmail.com)

See Also:

AbstractSeq

Method Summary

Methods

Modifier and Type	Method and Description
SeqBuilder<S>	append(S seq) Appends seq.
SeqBuilder<S>	clone() Returns a deep copy of this builder
S	createAndDestroy() Creates the sequence and destroys this builder.
SeqBuilder<S>	ensureCapacity(int capacity) Ensures capacity of this builder.
int	size() Size of sequence being created.

Method Detail

size

int size()

Size of sequence being created.

Returns:

size

ensureCapacity

SeqBuilder<S> ensureCapacity(int capacity)

Ensures capacity of this builder.

Parameters:

capacity - capacity

Returns:

this

createAndDestroy

S createAndDestroy()

Creates the sequence and destroys this builder.

Returns:

created sequence

append

SeqBuilder<S> append(S seq)

Appends seq.

Parameters:

seq - seq

Returns:

this

clone

SeqBuilder<S> clone()

Returns a deep copy of this builder

Returns:

a deep copy of this builder