public final class TranslationParameters extends Object
| Modifier and Type | Field and Description |
|---|---|
static TranslationParameters |
FromCenter |
static TranslationParameters |
FromLeftWithIncompleteCodon |
static TranslationParameters |
FromLeftWithoutIncompleteCodon |
static TranslationParameters |
FromRightWithIncompleteCodon |
static TranslationParameters |
FromRightWithoutIncompleteCodon |
| Modifier and Type | Method and Description |
|---|---|
boolean |
equals(Object o) |
byte |
getFrame() |
Boolean |
getFromLeft() |
static Collection<TranslationParameters> |
getPreDefinedParameters() |
int |
hashCode() |
boolean |
isIncludeIncomplete() |
String |
toString() |
static TranslationParameters |
withIncompleteCodon(int inFramePosition)
E.g.
|
static TranslationParameters |
withoutIncompleteCodon(int inFramePosition)
E.g.
|
public static final TranslationParameters FromCenter
public static final TranslationParameters FromLeftWithIncompleteCodon
public static final TranslationParameters FromLeftWithoutIncompleteCodon
public static final TranslationParameters FromRightWithIncompleteCodon
public static final TranslationParameters FromRightWithoutIncompleteCodon
public byte getFrame()
public Boolean getFromLeft()
public boolean isIncludeIncomplete()
public static TranslationParameters withIncompleteCodon(int inFramePosition)
inFramePosition - position of first nucleotide in any of in-frame tripletspublic static TranslationParameters withoutIncompleteCodon(int inFramePosition)
inFramePosition - position of first nucleotide in any of in-frame tripletspublic static Collection<TranslationParameters> getPreDefinedParameters()
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