Hierarchy For Package com.milaboratory.core.sequence

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • com.milaboratory.core.sequence.AbstractSeq<S> (implements com.milaboratory.core.sequence.Seq<S>)
    • com.milaboratory.core.sequence.Sequence<S> (implements java.lang.Comparable<T>, com.milaboratory.core.alignment.batch.HasSequence<S>)
      • com.milaboratory.core.sequence.AminoAcidSequence
      • com.milaboratory.core.sequence.NucleotideSequence (implements com.milaboratory.core.sequence.NSeq<S>, java.io.Serializable)
    • com.milaboratory.core.sequence.SequenceQuality (implements java.io.Serializable)
  • com.milaboratory.core.sequence.Alphabet<S> (implements java.io.Serializable)
    • com.milaboratory.core.sequence.AminoAcidAlphabet
    • com.milaboratory.core.sequence.NucleotideAlphabet
  • com.milaboratory.core.sequence.Alphabet.AlphabetSerialization (implements java.io.Serializable)
  • com.milaboratory.core.sequence.Alphabets
  • com.milaboratory.core.sequence.AminoAcidSequence.AminoAcidSequencePosition
  • com.milaboratory.core.sequence.ArraySeqBuilder<S,B> (implements com.milaboratory.core.sequence.SeqBuilder<S>)
    • com.milaboratory.core.sequence.SequenceQualityBuilder
  • com.milaboratory.core.sequence.GeneticCode
  • com.fasterxml.jackson.databind.JsonDeserializer<T>
    • com.milaboratory.core.sequence.Alphabets.Deserializer
  • com.fasterxml.jackson.databind.JsonSerializer<T> (implements com.fasterxml.jackson.databind.jsonFormatVisitors.JsonFormatVisitable)
    • com.milaboratory.core.sequence.Alphabets.Serializer
  • com.milaboratory.core.sequence.MultiNSequenceWithQualityImpl (implements com.milaboratory.core.sequence.MultiNSequenceWithQuality)
  • com.milaboratory.core.sequence.NSequenceWithQualityBuilder (implements com.milaboratory.core.sequence.SeqBuilder<S>)
  • com.milaboratory.core.sequence.SequencesUtils
  • com.milaboratory.core.sequence.SequenceWithQuality<S> (implements java.io.Serializable)
    • com.milaboratory.core.sequence.NSequenceWithQuality (implements com.milaboratory.core.sequence.MultiNSequenceWithQuality, com.milaboratory.core.sequence.NSeq<S>)
  • com.milaboratory.core.sequence.TranslationParameters
  • com.milaboratory.core.sequence.UnsafeFactory
  • com.milaboratory.core.sequence.Wildcard

Interface Hierarchy

• com.milaboratory.core.sequence.MultiNSequenceWithQuality
• com.milaboratory.core.sequence.Seq<S>
  • com.milaboratory.core.sequence.NSeq<S>
• com.milaboratory.core.sequence.SeqBuilder<S>
  • com.milaboratory.core.sequence.SequenceBuilder<S>