com.milaboratory.core.sequence.provider

Interface SequenceProvider<S extends Sequence<S>>

Type Parameters:

S - type of the sequence

All Known Implementing Classes:

CachedSequenceProvider, SequenceProviderUtils.LazySequenceProvider

public interface SequenceProvider<S extends Sequence<S>>

Provides access to the sequence that may be too big to be loaded to the memory. Such sequence may be stored remotely or in the file system.

Method Summary

Methods

Modifier and Type	Method and Description
S	getRegion(Range range) Retrieves specified region of the sequence.
int	size() Returns the length of the sequence this object represents.

Method Detail

size

int size()

Returns the length of the sequence this object represents.

Returns:

length of the sequence this object represents

getRegion

S getRegion(Range range)

Retrieves specified region of the sequence.

Parameters:

range - range of the sequence to be retrieved

Returns:

sequence