de.bioforscher.singa.structure.algorithms.superimposition.fit3d

Interface Fit3DBuilder.QueryStep

All Known Implementing Classes:

Fit3DBuilder.Builder

Enclosing class:

Fit3DBuilder

public static interface Fit3DBuilder.QueryStep

Method Summary

Modifier and Type	Method and Description
Fit3DBuilder.TargetStep	query(StructuralMotif query) Defines the query motif for this Fit3D search.
Fit3DBuilder.SiteStep	site(StructuralMotif site) Defines a site that should be aligned against another.

Method Detail

query

Fit3DBuilder.TargetStep query(StructuralMotif query)

Defines the query motif for this Fit3D search.

Parameters:

query - The query motif to be used.

Returns:

The Fit3DBuilder.TargetStep to define one or several targets.

site

Fit3DBuilder.SiteStep site(StructuralMotif site)

Defines a site that should be aligned against another.

Parameters:

site - The first site to be aligned.

Returns:

The Fit3DBuilder.SiteStep to define the antagonist.