Uses of Class
de.bioforscher.singa.structure.algorithms.superimposition.fit3d.Fit3DMatch

Packages that use Fit3DMatch

Package	Description
de.bioforscher.singa.structure.algorithms.superimposition.fit3d
de.bioforscher.singa.structure.algorithms.superimposition.fit3d.statistics

Uses of Fit3DMatch in de.bioforscher.singa.structure.algorithms.superimposition.fit3d

Methods in de.bioforscher.singa.structure.algorithms.superimposition.fit3d that return Fit3DMatch

Modifier and Type	Method and Description
static Fit3DMatch	Fit3DMatch.of(double rmsd)
static Fit3DMatch	Fit3DMatch.of(double rmsd, SubstructureSuperimposition substructureSuperimposition)
static Fit3DMatch	Fit3DMatch.of(double rmsd, SubstructureSuperimposition substructureSuperimposition, double pvalue)

Methods in de.bioforscher.singa.structure.algorithms.superimposition.fit3d that return types with arguments of type Fit3DMatch

Modifier and Type	Method and Description
List<Fit3DMatch>	Fit3DAlignmentBatch.getMatches() Returns all matches of this Fit3D batch calculation.
List<Fit3DMatch>	Fit3DSiteAlignment.getMatches()
List<Fit3DMatch>	Fit3D.getMatches() Returns the matches that were found by this Fit3D search.
List<Fit3DMatch>	Fit3DAlignment.getMatches() Returns the computed matches of this Fit3D search.

Methods in de.bioforscher.singa.structure.algorithms.superimposition.fit3d with parameters of type Fit3DMatch

Modifier and Type	Method and Description
int	Fit3DMatch.compareTo(Fit3DMatch other)

Uses of Fit3DMatch in de.bioforscher.singa.structure.algorithms.superimposition.fit3d.statistics

Method parameters in de.bioforscher.singa.structure.algorithms.superimposition.fit3d.statistics with type arguments of type Fit3DMatch

Modifier and Type	Method and Description
void	StarkEstimation.calculatePvalues(List<Fit3DMatch> matches)
void	StatisticalModel.calculatePvalues(List<Fit3DMatch> matches)
void	FofanovEstimation.calculatePvalues(List<Fit3DMatch> matches)