| Package | Description |
|---|---|
| de.bioforscher.singa.structure.model.families | |
| de.bioforscher.singa.structure.model.oak |
| Modifier and Type | Field and Description |
|---|---|
static EnumSet<MatcherFamily> |
MatcherFamily.ALL_AMINO_ACIDS |
static EnumSet<MatcherFamily> |
MatcherFamily.FUNCTIONAL
The following types are grouped according to functional chemical groups:
|
static EnumSet<MatcherFamily> |
MatcherFamily.GUTTERIDGE
The following types are grouped according to
|
| Modifier and Type | Method and Description |
|---|---|
static MatcherFamily |
MatcherFamily.valueOf(String name)
Returns the enum constant of this type with the specified name.
|
static MatcherFamily[] |
MatcherFamily.values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
| Modifier and Type | Method and Description |
|---|---|
void |
StructuralMotif.addExchangeableFamily(LeafIdentifier leafIdentifier,
MatcherFamily matcherFamily)
For a given
LeafIdentifier a possible exchange is added. |
void |
StructuralMotif.addExchangeableFamilyToAll(MatcherFamily matcherFamily)
Assigns each member of a
MatcherFamily to all members of this motif as exchange. |
| Modifier and Type | Method and Description |
|---|---|
static void |
StructuralMotifs.assignComplexExchanges(StructuralMotif structuralMotif,
EnumSet<MatcherFamily> familyGroup)
Assigns the given
EnumSet of exchanges to the specified StructuralMotif. |
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