Uses of Package
de.bioforscher.singa.structure.model.oak

Packages that use de.bioforscher.singa.structure.model.oak

Package	Description
de.bioforscher.singa.structure.algorithms.superimposition.affinity
de.bioforscher.singa.structure.algorithms.superimposition.consensus
de.bioforscher.singa.structure.algorithms.superimposition.fit3d
de.bioforscher.singa.structure.algorithms.superimposition.fit3d.statistics
de.bioforscher.singa.structure.model.families
de.bioforscher.singa.structure.model.interfaces
de.bioforscher.singa.structure.model.mmtf
de.bioforscher.singa.structure.model.molecules
de.bioforscher.singa.structure.model.oak
de.bioforscher.singa.structure.parser.pdb.structures
de.bioforscher.singa.structure.parser.pdb.structures.tokens
de.bioforscher.singa.structure.parser.plip

Classes in de.bioforscher.singa.structure.model.oak used by de.bioforscher.singa.structure.algorithms.superimposition.affinity

Class and Description
StructuralMotif

Classes in de.bioforscher.singa.structure.model.oak used by de.bioforscher.singa.structure.algorithms.superimposition.consensus

Class and Description
StructuralMotif

Classes in de.bioforscher.singa.structure.model.oak used by de.bioforscher.singa.structure.algorithms.superimposition.fit3d

Class and Description
StructuralMotif
StructuralMotif.Type The type of a StructuralMotif, representing inter (across multiple protein chains) and intra (within one protein chain) StructuralMotifs.

Classes in de.bioforscher.singa.structure.model.oak used by de.bioforscher.singa.structure.algorithms.superimposition.fit3d.statistics

Class and Description
StructuralMotif

Classes in de.bioforscher.singa.structure.model.oak used by de.bioforscher.singa.structure.model.families

Class and Description
AtomName Most (some) of the AtomNames in the PDB.

Classes in de.bioforscher.singa.structure.model.oak used by de.bioforscher.singa.structure.model.interfaces

Class and Description
Exchangeable Exchangeable defines an entity that is exchangeable in terms of mapping another label or a set of other labels to that entity.

Classes in de.bioforscher.singa.structure.model.oak used by de.bioforscher.singa.structure.model.mmtf

Class and Description
Exchangeable Exchangeable defines an entity that is exchangeable in terms of mapping another label or a set of other labels to that entity.

Classes in de.bioforscher.singa.structure.model.oak used by de.bioforscher.singa.structure.model.molecules

Class and Description
OakLeafSubstructure

Classes in de.bioforscher.singa.structure.model.oak used by de.bioforscher.singa.structure.model.oak

Class and Description
AtomName Most (some) of the AtomNames in the PDB.
BondType
Exchangeable Exchangeable defines an entity that is exchangeable in terms of mapping another label or a set of other labels to that entity.
OakAminoAcid
OakAtom
OakBond
OakChain
OakLeafSubstructure
OakLigand
OakModel
OakNucleotide
OakStructure
StructuralEntityFilter.AtomFilterType Simple StructuralEntityFilter.AtomFilter representation as functional Enum class.
StructuralEntityFilter.LeafFilterType Simple StructuralEntityFilter.LeafFilter representation as functional Enum class.
StructuralMotif
StructuralMotif.Type The type of a StructuralMotif, representing inter (across multiple protein chains) and intra (within one protein chain) StructuralMotifs.

Classes in de.bioforscher.singa.structure.model.oak used by de.bioforscher.singa.structure.parser.pdb.structures

Class and Description
OakModel
OakStructure
StructuralMotif

Classes in de.bioforscher.singa.structure.model.oak used by de.bioforscher.singa.structure.parser.pdb.structures.tokens

Class and Description
BondType
OakAtom
OakLeafSubstructure

Classes in de.bioforscher.singa.structure.model.oak used by de.bioforscher.singa.structure.parser.plip

Class and Description
OakStructure