de.bioforscher.singa.structure.parser.pdb.structures

Interface StructureParser.MultiChainStep

All Known Subinterfaces:

StructureParser.MultiBranchStep

Enclosing class:

StructureParser

public static interface StructureParser.MultiChainStep

Initiates the selection of chains, if multiple structures have been chosen.

Method Summary

Modifier and Type	Method and Description
StructureParser.MultiParser	allChains() Parses all chains.
StructureParser.MultiParser	chain(String chainIdentifier) If only a single chain should be parsed, choose it here.
StructureParser.MultiParser	everything() Shortcut to parse all chains.
List<Structure>	parse() Returns a list of parsed structures, skipping user contact with parsing.

Method Detail

chain

StructureParser.MultiParser chain(String chainIdentifier)

If only a single chain should be parsed, choose it here.

Parameters:

chainIdentifier - The chain to parse.

Returns:

The MultiParser.

allChains

StructureParser.MultiParser allChains()

Parses all chains.

Returns:

The MultiParser.

everything

StructureParser.MultiParser everything()

Shortcut to parse all chains.

Returns:

The MultiParser.

parse

List<Structure> parse()

Returns a list of parsed structures, skipping user contact with parsing.

Returns:

The specified structures.