de.bioforscher.singa.structure.parser.pfam.tokens

Enum PfamToken.PDBToken

java.lang.Object

java.lang.Enum<PfamToken.PDBToken>

de.bioforscher.singa.structure.parser.pfam.tokens.PfamToken.PDBToken

All Implemented Interfaces:

PfamToken, Serializable, Comparable<PfamToken.PDBToken>

Enclosing interface:

PfamToken

public static enum PfamToken.PDBToken
extends Enum<PfamToken.PDBToken>
implements PfamToken

Nested Class Summary

Nested classes/interfaces inherited from interface de.bioforscher.singa.structure.parser.pfam.tokens.PfamToken

PfamToken.IdentifierToken, PfamToken.PDBToken

Enum Constant Summary

Enum Constants

Enum Constant and Description
CHAIN_IDENTIFIER
PDB_IDENTIFIER
PDB_RESIDUE_END
PDB_RESIDUE_START

Field Summary

Fields inherited from interface de.bioforscher.singa.structure.parser.pfam.tokens.PfamToken

PFAM_MAPPING_FILE_SEPARATOR

Method Summary

Modifier and Type	Method and Description
int	getColumn()
static PfamToken.PDBToken	valueOf(String name) Returns the enum constant of this type with the specified name.
static PfamToken.PDBToken[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface de.bioforscher.singa.structure.parser.pfam.tokens.PfamToken

extract, extractValueFromPfamLine

Enum Constant Detail

PDB_IDENTIFIER

public static final PfamToken.PDBToken PDB_IDENTIFIER

CHAIN_IDENTIFIER

public static final PfamToken.PDBToken CHAIN_IDENTIFIER

PDB_RESIDUE_START

public static final PfamToken.PDBToken PDB_RESIDUE_START

PDB_RESIDUE_END

public static final PfamToken.PDBToken PDB_RESIDUE_END

Method Detail

values

public static PfamToken.PDBToken[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (PfamToken.PDBToken c : PfamToken.PDBToken.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static PfamToken.PDBToken valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null

getColumn

public int getColumn()

Specified by:

getColumn in interface PfamToken