Package de.julielab.costosys.medline

Class PubmedUpdater

java.lang.Object

de.julielab.costosys.medline.PubmedUpdater

public class PubmedUpdater
extends Object

Field Summary

Fields

Modifier and Type	Field	Description
static String	COLUMN_FILENAME
static String	COLUMN_IS_IMPORTED
static String	COLUMN_TIMESTAMP
static String	UPDATE_TABLE	Name of the table that keeps track of already imported and finished Medline update files.

Constructor Summary

Constructors

Constructor	Description
PubmedUpdater(org.apache.commons.configuration2.HierarchicalConfiguration<org.apache.commons.configuration2.tree.ImmutableNode> configuration)

Method Summary

Modifier and Type	Method	Description
protected File[]	getMedlineFiles(String medlinePathString)
void	process(DataBaseConnector dbc, boolean ignoreAlreadyProcessed)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

UPDATE_TABLE

public static final String UPDATE_TABLE

Name of the table that keeps track of already imported and finished Medline update files. Value: "_data._medline_update_files".

See Also:

Constant Field Values

COLUMN_FILENAME

public static final String COLUMN_FILENAME

See Also:

Constant Field Values

COLUMN_IS_IMPORTED

public static final String COLUMN_IS_IMPORTED

See Also:

Constant Field Values

COLUMN_TIMESTAMP

public static final String COLUMN_TIMESTAMP

See Also:

Constant Field Values

Constructor Detail

PubmedUpdater

public PubmedUpdater(org.apache.commons.configuration2.HierarchicalConfiguration<org.apache.commons.configuration2.tree.ImmutableNode> configuration)

Method Detail

process

public void process(DataBaseConnector dbc,
                    boolean ignoreAlreadyProcessed)
             throws MedlineUpdateException,
                    IOException

Throws:

MedlineUpdateException

IOException

getMedlineFiles

protected File[] getMedlineFiles(String medlinePathString)
                          throws FileNotFoundException

Throws:

FileNotFoundException