edu.umd.cloud9.collection.medline

Class MedlineCitation

java.lang.Object

edu.umd.cloud9.collection.Indexable

edu.umd.cloud9.collection.medline.MedlineCitation

All Implemented Interfaces:

org.apache.hadoop.io.Writable

public class MedlineCitation
extends Indexable

Object representing a MEDLINE citation.

Author:

Jimmy Lin

Field Summary

Fields

Modifier and Type	Field and Description
static String	XML_END_TAG End delimiter of the document, which is </MedlineCitation>.
static String	XML_START_TAG Start delimiter of the document, which is <MedlineCitation (without closing angle bracket).

Constructor Summary

Constructors

Constructor and Description
MedlineCitation() Creates an empty MedlineCitation object.

Method Summary

Methods

Modifier and Type	Method and Description
String	getAbstract() Returns the abstract of this citation.
String	getContent() Returns the content of this citation, which is the title and abstract.
String	getDocid() Returns the docid of this MEDLINE citation, which is its PMID.
String	getPmid() Returns the PMID of this MEDLINE citation.
String	getRawXML() Returns the raw XML of this citation.
String	getTitle() Returns the title of this MEDLINE citation.
static void	readCitation(MedlineCitation citation, String s) Reads a raw XML string into a MedlineCitation object.
void	readFields(DataInput in) Serializes this object.
void	write(DataOutput out) Deserializes this object.

Methods inherited from class edu.umd.cloud9.collection.Indexable

getDisplayContent, getDisplayContentType

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

XML_START_TAG

public static final String XML_START_TAG

Start delimiter of the document, which is <MedlineCitation (without closing angle bracket).

See Also:

Constant Field Values

XML_END_TAG

public static final String XML_END_TAG

End delimiter of the document, which is </MedlineCitation>.

See Also:

Constant Field Values

Constructor Detail

MedlineCitation

public MedlineCitation()

Creates an empty MedlineCitation object.

Method Detail

write

public void write(DataOutput out)
           throws IOException

Deserializes this object.

Throws:

IOException

readFields

public void readFields(DataInput in)
                throws IOException

Serializes this object.

Throws:

IOException

getDocid

public String getDocid()

Returns the docid of this MEDLINE citation, which is its PMID.

Specified by:

getDocid in class Indexable

Returns:

docid of the document

getContent

public String getContent()

Returns the content of this citation, which is the title and abstract.

Specified by:

getContent in class Indexable

Returns:

content of the document

getPmid

public String getPmid()

Returns the PMID of this MEDLINE citation.

getTitle

public String getTitle()

Returns the title of this MEDLINE citation.

getAbstract

public String getAbstract()

Returns the abstract of this citation.

getRawXML

public String getRawXML()

Returns the raw XML of this citation.

readCitation

public static void readCitation(MedlineCitation citation,
                String s)

Reads a raw XML string into a MedlineCitation object.

Parameters:

citation - the MedlineCitation object

s - raw XML string