edu.umd.hooka.alignment

Interfaces

• AlignmentEventListener

Classes

• AlignmentModel
• AssociationScoreTools
• Digamma
• EFMarginalCounter
• EFMarginalCounter.MarginalMapper
• EFMarginalCounter.MarginalReducer
• EFMarginals
• HadoopAlign
• HadoopAlign.AEListener
• HadoopAlign.AlignMapper
• HadoopAlign.AlignmentBase
• HadoopAlign.EMapper
• HadoopAlign.EMReducer
• HadoopAlign.FileReaderZip
• HadoopAlign.ModelMergeMapper
• HadoopAlignConfig
• HSymAlign
• HSymAlign.MapClass
• HSymAlign.Reduce
• IndexedFloatArray
• M1ViterbiExtract
• M1ViterbiExtract.M1ViterbiMapper
• PartialCountContainer
• PerplexityReporter
• Refiner
• RefinerFactory

Enums

• CrossEntropyCounters
• HadoopAlign.AlignmentEvalEnum

Exceptions

• ZeroProbabilityException