Package org.hl7.fhir

Class SequenceVariation

java.lang.Object

org.hl7.fhir.Element

org.hl7.fhir.BackboneElement

org.hl7.fhir.SequenceVariation

All Implemented Interfaces:

org.jvnet.jaxb2_commons.lang.Equals2, org.jvnet.jaxb2_commons.lang.HashCode2, org.jvnet.jaxb2_commons.lang.ToString2

public class SequenceVariation
extends BackboneElement
implements org.jvnet.jaxb2_commons.lang.Equals2, org.jvnet.jaxb2_commons.lang.HashCode2, org.jvnet.jaxb2_commons.lang.ToString2

Variation and Sequence data.

Java class for Sequence.Variation complex type.

The following schema fragment specifies the expected content contained within this class.

 <complexType name="Sequence.Variation">
   <complexContent>
     <extension base="{http://hl7.org/fhir}BackboneElement">
       <sequence>
         <element name="start" type="{http://hl7.org/fhir}integer" minOccurs="0"/>
         <element name="end" type="{http://hl7.org/fhir}integer" minOccurs="0"/>
         <element name="observedAllele" type="{http://hl7.org/fhir}string" minOccurs="0"/>
         <element name="referenceAllele" type="{http://hl7.org/fhir}string" minOccurs="0"/>
         <element name="cigar" type="{http://hl7.org/fhir}string" minOccurs="0"/>
       </sequence>
     </extension>
   </complexContent>
 </complexType>
 

Field Summary

Fields

Modifier and Type	Field	Description
protected String	cigar
protected Integer	end
protected String	observedAllele
protected String	referenceAllele
protected Integer	start

Fields inherited from class org.hl7.fhir.BackboneElement

modifierExtension

Fields inherited from class org.hl7.fhir.Element

extension, id

Constructor Summary

Constructors

Constructor	Description
SequenceVariation()

Method Summary

Modifier and Type	Method	Description
java.lang.StringBuilder	append(org.jvnet.jaxb2_commons.locator.ObjectLocator locator, java.lang.StringBuilder buffer, org.jvnet.jaxb2_commons.lang.ToStringStrategy2 strategy)
java.lang.StringBuilder	appendFields(org.jvnet.jaxb2_commons.locator.ObjectLocator locator, java.lang.StringBuilder buffer, org.jvnet.jaxb2_commons.lang.ToStringStrategy2 strategy)
boolean	equals(java.lang.Object object)
boolean	equals(org.jvnet.jaxb2_commons.locator.ObjectLocator thisLocator, org.jvnet.jaxb2_commons.locator.ObjectLocator thatLocator, java.lang.Object object, org.jvnet.jaxb2_commons.lang.EqualsStrategy2 strategy)
String	getCigar()	Gets the value of the cigar property.
Integer	getEnd()	Gets the value of the end property.
String	getObservedAllele()	Gets the value of the observedAllele property.
String	getReferenceAllele()	Gets the value of the referenceAllele property.
Integer	getStart()	Gets the value of the start property.
int	hashCode()
int	hashCode(org.jvnet.jaxb2_commons.locator.ObjectLocator locator, org.jvnet.jaxb2_commons.lang.HashCodeStrategy2 strategy)
void	setCigar(String value)	Sets the value of the cigar property.
void	setEnd(Integer value)	Sets the value of the end property.
void	setObservedAllele(String value)	Sets the value of the observedAllele property.
void	setReferenceAllele(String value)	Sets the value of the referenceAllele property.
void	setStart(Integer value)	Sets the value of the start property.
java.lang.String	toString()
SequenceVariation	withCigar(String value)
SequenceVariation	withEnd(Integer value)
SequenceVariation	withExtension(java.util.Collection<Extension> values)
SequenceVariation	withExtension(Extension... values)
SequenceVariation	withId(java.lang.String value)
SequenceVariation	withModifierExtension(java.util.Collection<Extension> values)
SequenceVariation	withModifierExtension(Extension... values)
SequenceVariation	withObservedAllele(String value)
SequenceVariation	withReferenceAllele(String value)
SequenceVariation	withStart(Integer value)

Methods inherited from class org.hl7.fhir.BackboneElement

getModifierExtension

Methods inherited from class org.hl7.fhir.Element

getExtension, getId, setId

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

start

protected Integer start

end

protected Integer end

observedAllele

protected String observedAllele

referenceAllele

protected String referenceAllele

cigar

protected String cigar

Constructor Detail

SequenceVariation

public SequenceVariation()

Method Detail

getStart

public Integer getStart()

Gets the value of the start property.

Returns:

possible object is Integer

setStart

public void setStart(Integer value)

Sets the value of the start property.

Parameters:

value - allowed object is Integer

getEnd

public Integer getEnd()

Gets the value of the end property.

Returns:

possible object is Integer

setEnd

public void setEnd(Integer value)

Sets the value of the end property.

Parameters:

value - allowed object is Integer

getObservedAllele

public String getObservedAllele()

Gets the value of the observedAllele property.

Returns:

possible object is String

setObservedAllele

public void setObservedAllele(String value)

Sets the value of the observedAllele property.

Parameters:

value - allowed object is String

getReferenceAllele

public String getReferenceAllele()

Gets the value of the referenceAllele property.

Returns:

possible object is String

setReferenceAllele

public void setReferenceAllele(String value)

Sets the value of the referenceAllele property.

Parameters:

value - allowed object is String

getCigar

public String getCigar()

Gets the value of the cigar property.

Returns:

possible object is String

setCigar

public void setCigar(String value)

Sets the value of the cigar property.

Parameters:

value - allowed object is String

withStart

public SequenceVariation withStart(Integer value)

withEnd

public SequenceVariation withEnd(Integer value)

withObservedAllele

public SequenceVariation withObservedAllele(String value)

withReferenceAllele

public SequenceVariation withReferenceAllele(String value)

withCigar

public SequenceVariation withCigar(String value)

withModifierExtension

public SequenceVariation withModifierExtension(Extension... values)

Overrides:

withModifierExtension in class BackboneElement

withModifierExtension

public SequenceVariation withModifierExtension(java.util.Collection<Extension> values)

Overrides:

withModifierExtension in class BackboneElement

withExtension

public SequenceVariation withExtension(Extension... values)

Overrides:

withExtension in class BackboneElement

withExtension

public SequenceVariation withExtension(java.util.Collection<Extension> values)

Overrides:

withExtension in class BackboneElement

withId

public SequenceVariation withId(java.lang.String value)

Overrides:

withId in class BackboneElement

equals

public boolean equals(org.jvnet.jaxb2_commons.locator.ObjectLocator thisLocator,
                      org.jvnet.jaxb2_commons.locator.ObjectLocator thatLocator,
                      java.lang.Object object,
                      org.jvnet.jaxb2_commons.lang.EqualsStrategy2 strategy)

Specified by:

equals in interface org.jvnet.jaxb2_commons.lang.Equals2

Overrides:

equals in class BackboneElement

equals

public boolean equals(java.lang.Object object)

Overrides:

equals in class BackboneElement

hashCode

public int hashCode(org.jvnet.jaxb2_commons.locator.ObjectLocator locator,
                    org.jvnet.jaxb2_commons.lang.HashCodeStrategy2 strategy)

Specified by:

hashCode in interface org.jvnet.jaxb2_commons.lang.HashCode2

Overrides:

hashCode in class BackboneElement

hashCode

public int hashCode()

Overrides:

hashCode in class BackboneElement

toString

public java.lang.String toString()

Overrides:

toString in class BackboneElement

append

public java.lang.StringBuilder append(org.jvnet.jaxb2_commons.locator.ObjectLocator locator,
                                      java.lang.StringBuilder buffer,
                                      org.jvnet.jaxb2_commons.lang.ToStringStrategy2 strategy)

Specified by:

append in interface org.jvnet.jaxb2_commons.lang.ToString2

Overrides:

append in class BackboneElement

appendFields

public java.lang.StringBuilder appendFields(org.jvnet.jaxb2_commons.locator.ObjectLocator locator,
                                            java.lang.StringBuilder buffer,
                                            org.jvnet.jaxb2_commons.lang.ToStringStrategy2 strategy)

Specified by:

appendFields in interface org.jvnet.jaxb2_commons.lang.ToString2

Overrides:

appendFields in class BackboneElement