Package elki.clustering.affinitypropagation

Class SimilarityBasedInitializationWithMedian<O>

java.lang.Object

elki.clustering.affinitypropagation.SimilarityBasedInitializationWithMedian<O>

Type Parameters:

O - Object type

All Implemented Interfaces:

AffinityPropagationInitialization<O>

public class SimilarityBasedInitializationWithMedian<O>
extends java.lang.Object
implements AffinityPropagationInitialization<O>

Similarity based initialization.

Since:

0.6.0

Author:

Erich Schubert

Field Summary

Fields

Modifier and Type	Field	Description
(package private) double	quantile	Quantile to use.
(package private) elki.similarity.Similarity<? super O>	similarity	Similarity function.

Fields inherited from interface elki.clustering.affinitypropagation.AffinityPropagationInitialization

QUANTILE_ID

Constructor Summary

Constructors

Constructor	Description
SimilarityBasedInitializationWithMedian(elki.similarity.Similarity<? super O> similarity, double quantile)	Constructor.

Method Summary

Modifier and Type	Method	Description
elki.data.type.TypeInformation	getInputTypeRestriction()	Get the data type information for the similarity computations.
double[][]	getSimilarityMatrix(elki.database.relation.Relation<O> relation, elki.database.ids.ArrayDBIDs ids)	Compute the initial similarity matrix.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

similarity

elki.similarity.Similarity<? super O> similarity

Similarity function.

quantile

double quantile

Quantile to use.

Constructor Detail

SimilarityBasedInitializationWithMedian

public SimilarityBasedInitializationWithMedian(elki.similarity.Similarity<? super O> similarity,
                                               double quantile)

Constructor.

Parameters:

similarity - Similarity function

quantile - Quantile

Method Detail

getSimilarityMatrix

public double[][] getSimilarityMatrix(elki.database.relation.Relation<O> relation,
                                      elki.database.ids.ArrayDBIDs ids)

Description copied from interface: AffinityPropagationInitialization

Compute the initial similarity matrix.

Specified by:

getSimilarityMatrix in interface AffinityPropagationInitialization<O>

Parameters:

relation - Data relation

ids - indexed DBIDs

Returns:

Similarity matrix

getInputTypeRestriction

public elki.data.type.TypeInformation getInputTypeRestriction()

Description copied from interface: AffinityPropagationInitialization

Get the data type information for the similarity computations.

Specified by:

getInputTypeRestriction in interface AffinityPropagationInitialization<O>

Returns:

Data type