Uses of Class
elki.clustering.hierarchical.ClusterDistanceMatrix

Packages that use ClusterDistanceMatrix

Package	Description
elki.clustering.hierarchical	Hierarchical agglomerative clustering (HAC).

Uses of ClusterDistanceMatrix in elki.clustering.hierarchical

Fields in elki.clustering.hierarchical declared as ClusterDistanceMatrix

Modifier and Type	Field	Description
protected ClusterDistanceMatrix	AGNES.Instance.mat	Cluster distance matrix

Methods in elki.clustering.hierarchical that return ClusterDistanceMatrix

Modifier and Type	Method	Description
protected static ClusterDistanceMatrix	AGNES.initializeDistanceMatrix(elki.database.ids.ArrayDBIDs ids, elki.database.query.distance.DistanceQuery<?> dq, Linkage linkage)	Initialize a distance matrix.
protected static <O> ClusterDistanceMatrix	MiniMax.initializeMatrices(elki.database.ids.ArrayDBIDs ids, elki.database.ids.ArrayModifiableDBIDs prots, elki.database.query.distance.DistanceQuery<O> dq)	Initializes the inter-cluster distance matrix of possible merges

Methods in elki.clustering.hierarchical with parameters of type ClusterDistanceMatrix

Modifier and Type	Method	Description
ClusterMergeHistory	AGNES.Instance.run(ClusterDistanceMatrix mat, ClusterMergeHistoryBuilder builder)	Run the main algorithm.
ClusterMergeHistory	Anderberg.Instance.run(ClusterDistanceMatrix mat, ClusterMergeHistoryBuilder builder)
ClusterMergeHistory	HACAM.Instance.run(ClusterDistanceMatrix mat, ClusterMergeHistoryBuilder builder)
ClusterPrototypeMergeHistory	HACAM.Instance.run(elki.database.ids.ArrayDBIDs ids, ClusterDistanceMatrix mat, ClusterMergeHistoryBuilder builder, elki.database.query.distance.DistanceQuery<?> dq, elki.database.ids.DBIDArrayMIter prots)	Run HACAM linkage
ClusterMergeHistory	MedoidLinkage.Instance.run(ClusterDistanceMatrix mat, ClusterMergeHistoryBuilder builder)
ClusterPrototypeMergeHistory	MedoidLinkage.Instance.run(elki.database.ids.ArrayDBIDs ids, ClusterDistanceMatrix mat, ClusterMergeHistoryBuilder builder, elki.database.query.distance.DistanceQuery<?> dq)	Run medoid linkage
ClusterMergeHistory	MiniMax.Instance.run(ClusterDistanceMatrix mat, ClusterMergeHistoryBuilder builder)
ClusterPrototypeMergeHistory	MiniMax.Instance.run(elki.database.ids.ArrayDBIDs ids, ClusterDistanceMatrix mat, ClusterMergeHistoryBuilder builder, elki.database.query.distance.DistanceQuery<?> dq, elki.database.ids.DBIDArrayMIter prots)
ClusterPrototypeMergeHistory	MiniMaxAnderberg.Instance.run(elki.database.ids.ArrayDBIDs ids, ClusterDistanceMatrix mat, ClusterMergeHistoryBuilder builder, elki.database.query.distance.DistanceQuery<?> dq, elki.database.ids.DBIDArrayMIter prots)
ClusterPrototypeMergeHistory	MiniMaxNNChain.Instance.run(elki.database.ids.ArrayDBIDs ids, ClusterDistanceMatrix mat, ClusterMergeHistoryBuilder builder, elki.database.query.distance.DistanceQuery<?> dq, elki.database.ids.DBIDArrayMIter prots)
ClusterMergeHistory	NNChain.Instance.run(ClusterDistanceMatrix mat, ClusterMergeHistoryBuilder builder)