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I

i - Variable in class elki.clustering.correlation.ORCLUS.ProjectedEnergy
Origin cluster indexes
idmap - Variable in class elki.index.tree.betula.CFTree
Stored leaf entry to dbid relation
ids - Variable in class elki.clustering.dbscan.predicates.AbstractRangeQueryNeighborPredicate.Instance
DBIDs to process
ids - Variable in class elki.clustering.dbscan.predicates.COPACNeighborPredicate.COPACModel
Neighbor ids.
ids - Variable in class elki.clustering.dbscan.predicates.EpsilonNeighborPredicate.Instance
DBIDs to process
ids - Variable in class elki.clustering.dbscan.predicates.PreDeConNeighborPredicate.PreDeConModel
Neighbor ids.
ids - Variable in class elki.clustering.dbscan.predicates.SimilarityNeighborPredicate.Instance
DBIDs to process
ids - Variable in class elki.clustering.hierarchical.AbstractHDBSCAN.HDBSCANAdapter
IDs to process.
ids - Variable in class elki.clustering.hierarchical.ClusterMergeHistory
The initial DBIDs
ids - Variable in class elki.clustering.hierarchical.ClusterMergeHistoryBuilder
The DBIDs in this result.
ids - Variable in class elki.clustering.kmeans.initialization.KMeansPlusPlus.Instance
Object IDs
ids - Variable in class elki.clustering.kmedoids.CLARANS.Assignment
Ids to process.
ids - Variable in class elki.clustering.kmedoids.PAM.Instance
Ids to process.
ids - Variable in class elki.clustering.kmedoids.SingleAssignmentKMedoids.Instance
Ids to process.
ids - Variable in class elki.clustering.optics.ClusterOrder
Cluster order.
ids - Variable in class elki.clustering.optics.GeneralizedOPTICS.Instance
IDs to process.
ids - Variable in class elki.clustering.optics.OPTICSHeap.Instance
IDs to process.
ids - Variable in class elki.clustering.optics.OPTICSList.Instance
IDs to process.
ids - Variable in class elki.clustering.silhouette.FastMSC.Instance
Ids to process.
ids - Variable in class elki.clustering.silhouette.FastMSC.Instance2
Ids to process.
ids - Variable in class elki.clustering.silhouette.PAMSIL.Instance
Ids to process.
ids - Variable in class elki.clustering.subspace.clique.CLIQUEUnit
The ids of the feature vectors this unit contains.
ids - Variable in class elki.clustering.subspace.P3C.ClusterCandidate
Objects contained in cluster.
ids - Variable in class elki.clustering.subspace.P3C.Signature
Object ids.
ids - Variable in class elki.data.Cluster
Cluster data.
IGNORE_NOISE - elki.evaluation.clustering.internal.NoiseHandling
Ignore all noise points
IGNORE_WEIGHT_ID - Static variable in class elki.clustering.kmeans.BetulaLloydKMeans.Par
Ignore cluster weights (naive approach)
ignoreWeight - Variable in class elki.clustering.kmeans.BetulaLloydKMeans
Ignore weight
ignoreWeight - Variable in class elki.clustering.kmeans.BetulaLloydKMeans.Par
Ignore weight
inBoth - Variable in class elki.evaluation.clustering.PairCounting
Pairs in both clusterings.
incrementalUpdateMean(double[], NumberVector, int, double) - Static method in class elki.clustering.kmeans.AbstractKMeans
Compute an incremental update for the mean.
index - Variable in class elki.clustering.optics.FastOPTICS
Index.
index - Variable in class elki.clustering.optics.OPTICSXi.SteepScanPosition
Current position
indices - Variable in class elki.clustering.kmeans.KDTreePruningKMeans.Instance
Array of candidate indexes.
inFirst - Variable in class elki.evaluation.clustering.PairCounting
Pairs in first clustering only.
informationCriterion - Variable in class elki.clustering.kmeans.XMeans
Information criterion to choose the better split.
INIT_ID - Static variable in class elki.clustering.em.BetulaGMM.Par
Parameter to specify the EM cluster models to use.
INIT_ID - Static variable in interface elki.clustering.em.models.BetulaClusterModelFactory
Parameter to specify the cluster center initialization.
INIT_ID - Static variable in interface elki.clustering.em.models.EMClusterModelFactory
Parameter to specify the cluster center initialization.
INIT_ID - Static variable in class elki.clustering.kmeans.FuzzyCMeans.Par
Parameter for k-Means init for initial cluster centers
INIT_ID - Static variable in interface elki.clustering.kmeans.KMeans
Parameter to specify the initialization method
INIT_P - Static variable in class elki.clustering.kmedoids.initialization.AlternateRefinement.Par
Nested inner initialization.
initial(double, boolean) - Method in interface elki.clustering.hierarchical.linkage.Linkage
Initialization of the distance matrix.
initial(double, boolean) - Method in class elki.clustering.hierarchical.linkage.MinimumVarianceLinkage
 
initial(double, boolean) - Method in class elki.clustering.hierarchical.linkage.WardLinkage
 
INITIAL_MEANS - Static variable in class elki.clustering.kmeans.initialization.Predefined.Par
Option to specify the initial means to use.
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.AnnulusKMeans.Instance
 
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.ElkanKMeans.Instance
 
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.ExponionKMeans.Instance
 
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.HamerlyKMeans.Instance
Perform initial cluster assignment.
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.HartiganWongKMeans.Instance
Step 1: For each point I, find its two closest centers, IC1(I) and IC2(I).
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.ShallotKMeans.Instance
 
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.SimplifiedElkanKMeans.Instance
Perform initial cluster assignment.
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.spherical.EuclideanSphericalElkanKMeans.Instance
 
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.spherical.EuclideanSphericalHamerlyKMeans.Instance
Perform initial cluster assignment.
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.spherical.EuclideanSphericalSimplifiedElkanKMeans.Instance
Perform initial cluster assignment.
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.spherical.SphericalElkanKMeans.Instance
 
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.spherical.SphericalHamerlyKMeans.Instance
Perform initial cluster assignment.
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.spherical.SphericalSimplifiedElkanKMeans.Instance
Perform initial cluster assignment.
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.spherical.SphericalSimplifiedHamerlyKMeans.Instance
Perform initial cluster assignment.
initialAssignToNearestCluster() - Method in class elki.clustering.kmeans.YinYangKMeans.Instance
Perform initial cluster assignment,
initialDBID(DBIDRef) - Method in class elki.clustering.correlation.HiCO.Instance
 
initialDBID(DBIDRef) - Method in class elki.clustering.optics.GeneralizedOPTICS.Instance
Initialize for a new DBID.
initialDBID(DBIDRef) - Method in class elki.clustering.subspace.HiSC.Instance
 
initialGroupAssignment(int, double[][], int[]) - Method in class elki.clustering.kmeans.YinYangKMeans.Instance
Initial k-means assignment for centers to groups.
initialization - Variable in class elki.clustering.affinitypropagation.AffinityPropagation
Similarity initialization
initialization - Variable in class elki.clustering.em.BetulaGMM.Par
initialization method
initialization - Variable in class elki.clustering.hierarchical.birch.BIRCHLloydKMeans
k-means++ initialization
initialization - Variable in class elki.clustering.hierarchical.birch.BIRCHLloydKMeans.Par
initialization method
initialization - Variable in class elki.clustering.kmeans.BetulaLloydKMeans
k-means++ initialization
initialization - Variable in class elki.clustering.kmeans.BetulaLloydKMeans.Par
initialization method
initialize() - Method in class elki.clustering.kmeans.HartiganWongKMeans.Instance
Initialize AN1, AN2, ITRAN, NCP
initializeDistanceMatrix(ArrayDBIDs, DistanceQuery<?>, Linkage) - Static method in class elki.clustering.hierarchical.AGNES
Initialize a distance matrix.
initializeMatrices(ArrayDBIDs, ArrayModifiableDBIDs, DistanceQuery<O>) - Static method in class elki.clustering.hierarchical.MiniMax
Initializes the inter-cluster distance matrix of possible merges
initializeNNCache(double[], double[], int[]) - Static method in class elki.clustering.hierarchical.Anderberg.Instance
Initialize the NN cache.
initializer - Variable in class elki.clustering.em.BetulaGMM
Maximum number of iterations.
initializer - Variable in class elki.clustering.em.models.BetulaDiagonalGaussianModelFactory
Class to choose the initial means
initializer - Variable in class elki.clustering.em.models.BetulaDiagonalGaussianModelFactory.Par
Initialization method
initializer - Variable in class elki.clustering.em.models.BetulaMultivariateGaussianModelFactory
Class to choose the initial means
initializer - Variable in class elki.clustering.em.models.BetulaMultivariateGaussianModelFactory.Par
Initialization method
initializer - Variable in class elki.clustering.em.models.BetulaSphericalGaussianModelFactory
Class to choose the initial means
initializer - Variable in class elki.clustering.em.models.BetulaSphericalGaussianModelFactory.Par
Initialization method
initializer - Variable in class elki.clustering.em.models.DiagonalGaussianModelFactory
Class to choose the initial means
initializer - Variable in class elki.clustering.em.models.MultivariateGaussianModelFactory
Class to choose the initial means
initializer - Variable in class elki.clustering.em.models.SphericalGaussianModelFactory
Class to choose the initial means
initializer - Variable in class elki.clustering.em.models.TextbookMultivariateGaussianModelFactory
Class to choose the initial means
initializer - Variable in class elki.clustering.em.models.TextbookSphericalGaussianModelFactory
Class to choose the initial means
initializer - Variable in class elki.clustering.em.models.TwoPassMultivariateGaussianModelFactory
Class to choose the initial means
initializer - Variable in class elki.clustering.kmeans.AbstractKMeans
Method to choose initial means.
initializer - Variable in class elki.clustering.kmeans.AbstractKMeans.Par
Initialization method.
initializer - Variable in class elki.clustering.kmeans.FuzzyCMeans
Produces initial cluster.
initializer - Variable in class elki.clustering.kmeans.FuzzyCMeans.Par
K-Means init for initial cluster centers
initializer - Variable in class elki.clustering.kmedoids.AlternatingKMedoids
Method to choose initial means.
initializer - Variable in class elki.clustering.kmedoids.AlternatingKMedoids.Par
Initialization method.
initializer - Variable in class elki.clustering.kmedoids.PAM
Method to choose initial means.
initializer - Variable in class elki.clustering.kmedoids.PAM.Par
Method to choose initial means.
initialMeans - Variable in class elki.clustering.kmeans.initialization.Predefined
Initial means to return.
initialMeans - Variable in class elki.clustering.kmeans.initialization.Predefined.Par
Initial means.
initialMeans(Relation<V>) - Method in class elki.clustering.kmeans.AbstractKMeans
Choose the initial means.
initialMedoids(DistanceQuery<? super O>, DBIDs, int) - Method in class elki.clustering.kmedoids.PAM
Choose the initial medoids.
initialSeeds(Relation<? extends NumberVector>, int) - Method in class elki.clustering.correlation.ORCLUS
Initializes the list of seeds wit a random sample of size k.
initialSeparation(double[][]) - Method in class elki.clustering.kmeans.spherical.SphericalKMeans.Instance
Initial separation of means.
initialSeperation(double[][]) - Method in class elki.clustering.kmeans.AbstractKMeans.Instance
Initial separation of means.
initialSet(DBIDs, int, Random) - Method in class elki.clustering.subspace.PROCLUS
Returns a set of k elements from the specified sample set.
initialWeights(double[], double[][]) - Method in class elki.clustering.hierarchical.birch.BIRCHKMeansPlusPlus
Initialize the weight list.
initialWeights(NumberVector) - Method in class elki.clustering.kmeans.initialization.KMC2.Instance
Initialize the weight list.
initialWeights(NumberVector) - Method in class elki.clustering.kmeans.initialization.SphericalAFKMC2.Instance
 
initialWeights(NumberVector) - Method in class elki.clustering.kmeans.initialization.SphericalKMeansPlusPlus.Instance
Initialize the weight list.
initialWeights(ClusterFeature, List<? extends AsClusterFeature>, double[]) - Method in class elki.clustering.kmeans.initialization.betula.CFKPlusPlusLeaves
Initialize the weight list.
initialWeights(T) - Method in class elki.clustering.kmeans.initialization.KMeansPlusPlus.Instance
Initialize the weight list.
initOneDimensionalUnits(Relation<? extends NumberVector>) - Method in class elki.clustering.subspace.CLIQUE
Initializes and returns the one dimensional units.
initStream(InputStream) - Method in class elki.datasource.parser.ClusteringVectorParser
 
inner - Variable in class elki.clustering.hierarchical.OPTICSToHierarchical
Inner OPTICS clustering algorithm.
inner - Variable in class elki.clustering.hierarchical.OPTICSToHierarchical.Par
Inner OPTICS clustering algorithm.
inner - Variable in class elki.clustering.kmedoids.CLARA.CachedDistanceQuery
Inner distance query
inner - Variable in class elki.clustering.kmedoids.initialization.AlternateRefinement
Inner initialization.
inner - Variable in class elki.clustering.kmedoids.initialization.AlternateRefinement.Par
Inner initialization.
inner - Variable in class elki.clustering.kmedoids.initialization.KMedoidsKMedoidsInitialization
Inner k-medoids clustering to use.
inner - Variable in class elki.clustering.kmedoids.initialization.KMedoidsKMedoidsInitialization.Par
Clustering algorithm
inner - Variable in class elki.evaluation.clustering.extractor.CutDendrogramByHeightExtractor
Class to perform the cluster extraction.
inner - Variable in class elki.evaluation.clustering.extractor.CutDendrogramByHeightExtractor.Par
Inner algorithm to extract a clustering.
inner - Variable in class elki.evaluation.clustering.extractor.CutDendrogramByNumberOfClustersExtractor
Class to perform the cluster extraction.
inner - Variable in class elki.evaluation.clustering.extractor.CutDendrogramByNumberOfClustersExtractor.Par
Inner algorithm to extract a clustering.
inner - Variable in class elki.evaluation.clustering.extractor.HDBSCANHierarchyExtractionEvaluator
Class to perform the cluster extraction.
inner - Variable in class elki.evaluation.clustering.extractor.HDBSCANHierarchyExtractionEvaluator.Par
Inner algorithm to extract a clustering.
inner - Variable in class elki.evaluation.clustering.extractor.SimplifiedHierarchyExtractionEvaluator
Class to perform the cluster extraction.
inner - Variable in class elki.evaluation.clustering.extractor.SimplifiedHierarchyExtractionEvaluator.Par
Inner algorithm to extract a clustering.
INNER_ID - Static variable in class elki.clustering.kmedoids.initialization.KMedoidsKMedoidsInitialization.Par
Option ID for the nested k-medoids clustering algorithm.
innerkMeans - Variable in class elki.clustering.kmeans.BestOfMultipleKMeans
Variant of kMeans for the bisecting step.
innerkMeans - Variable in class elki.clustering.kmeans.BisectingKMeans
Variant of kMeans for the bisecting step.
innerkMeans - Variable in class elki.clustering.kmeans.initialization.SampleKMeans
Variant of kMeans to use for initialization.
innerKMeans - Variable in class elki.clustering.kmeans.XMeans
Inner k-means algorithm.
inNone - Variable in class elki.evaluation.clustering.PairCounting
Pairs in neither clusterings.
inSecond - Variable in class elki.evaluation.clustering.PairCounting
Pairs in second clustering only.
insert(CFTree.TreeNode, ClusteringFeature) - Method in class elki.clustering.hierarchical.birch.CFTree
Recursive insertion.
insert(CFTree.TreeNode, NumberVector) - Method in class elki.clustering.hierarchical.birch.CFTree
Recursive insertion.
insert(NumberVector) - Method in class elki.clustering.hierarchical.birch.CFTree
Insert a data point into the tree.
insert(NumberVector, DBIDRef) - Method in class elki.index.tree.betula.CFTree
Insert a data point into the tree.
insert(CFNode<L>, NumberVector, DBIDRef) - Method in class elki.index.tree.betula.CFTree
Recursive insertion.
insert(CFNode<L>, AsClusterFeature) - Method in class elki.index.tree.betula.CFTree
Recursive insertion.
insertIntoGrid(DBIDRef, V, int, int) - Method in class elki.clustering.dbscan.GriDBSCAN.Instance
Insert a single object into the grid; potentially into multiple cells (at most 2^d) via recursion.
Instance() - Constructor for class elki.clustering.dbscan.DBSCAN.Instance
 
Instance() - Constructor for class elki.clustering.hierarchical.MedoidLinkage.Instance
Constructor.
Instance() - Constructor for class elki.clustering.hierarchical.MiniMax.Instance
Constructor.
Instance() - Constructor for class elki.clustering.hierarchical.MiniMaxAnderberg.Instance
 
Instance() - Constructor for class elki.clustering.hierarchical.MiniMaxNNChain.Instance
 
Instance(double, RangeSearcher<DBIDRef>, DBIDs) - Constructor for class elki.clustering.dbscan.predicates.EpsilonNeighborPredicate.Instance
Constructor.
Instance(double, RangeSearcher<DBIDRef>, DBIDs) - Constructor for class elki.clustering.dbscan.predicates.SimilarityNeighborPredicate.Instance
Constructor.
Instance(int) - Constructor for class elki.clustering.dbscan.predicates.MinPtsCorePredicate.Instance
Constructor for this predicate.
Instance(FourC.Settings) - Constructor for class elki.clustering.dbscan.predicates.FourCCorePredicate.Instance
Constructor for this predicate.
Instance(NeighborPredicate.Instance<T>, CorePredicate.Instance<? super T>, boolean) - Constructor for class elki.clustering.dbscan.GeneralizedDBSCAN.Instance
Full Constructor
Instance(ClusterMergeHistory) - Constructor for class elki.clustering.hierarchical.extraction.AbstractCutDendrogram.Instance
Constructor.
Instance(ClusterMergeHistory) - Constructor for class elki.clustering.hierarchical.extraction.ClustersWithNoiseExtraction.Instance
Constructor.
Instance(ClusterMergeHistory) - Constructor for class elki.clustering.hierarchical.extraction.CutDendrogramByHeight.Instance
Constructor.
Instance(ClusterMergeHistory) - Constructor for class elki.clustering.hierarchical.extraction.CutDendrogramByNumberOfClusters.Instance
Constructor.
Instance(ClusterMergeHistory) - Constructor for class elki.clustering.hierarchical.extraction.HDBSCANHierarchyExtraction.Instance
Constructor.
Instance(ClusterMergeHistory) - Constructor for class elki.clustering.hierarchical.extraction.SimplifiedHierarchyExtraction.Instance
Constructor.
Instance(HACAM.Variant) - Constructor for class elki.clustering.hierarchical.HACAM.Instance
Constructor.
Instance(GeometricLinkage) - Constructor for class elki.clustering.hierarchical.LinearMemoryNNChain.Instance
Constructor.
Instance(Linkage) - Constructor for class elki.clustering.hierarchical.AGNES.Instance
Constructor.
Instance(Linkage) - Constructor for class elki.clustering.hierarchical.Anderberg.Instance
Constructor.
Instance(Linkage) - Constructor for class elki.clustering.hierarchical.NNChain.Instance
Constructor.
Instance(PreDeCon.Settings) - Constructor for class elki.clustering.dbscan.predicates.PreDeConCorePredicate.Instance
Constructor for this predicate.
Instance(Database, NeighborPredicate<T>, CorePredicate<? super T>, boolean) - Constructor for class elki.clustering.dbscan.parallel.ParallelGeneralizedDBSCAN.Instance
Full Constructor
Instance(DBIDs) - Constructor for class elki.clustering.optics.GeneralizedOPTICS.Instance
Constructor for a single data set.
Instance(DBIDs, DataStore<COPACNeighborPredicate.COPACModel>) - Constructor for class elki.clustering.dbscan.predicates.COPACNeighborPredicate.Instance
Constructor.
Instance(DBIDs, DataStore<PreDeConNeighborPredicate.PreDeConModel>) - Constructor for class elki.clustering.dbscan.predicates.FourCNeighborPredicate.Instance
Constructor.
Instance(DBIDs, DataStore<PreDeConNeighborPredicate.PreDeConModel>) - Constructor for class elki.clustering.dbscan.predicates.PreDeConNeighborPredicate.Instance
Constructor.
Instance(DBIDs, DataStore<PCAFilteredResult>, Relation<? extends NumberVector>) - Constructor for class elki.clustering.dbscan.predicates.ERiCNeighborPredicate.Instance
Constructor.
Instance(DBIDs, DataStore<M>) - Constructor for class elki.clustering.dbscan.predicates.AbstractRangeQueryNeighborPredicate.Instance
Constructor.
Instance(DBIDs, RandomFactory) - Constructor for class elki.clustering.kmeans.initialization.KMeansPlusPlus.Instance
Constructor.
Instance(DistanceQuery<?>, DBIDs, WritableIntegerDataStore) - Constructor for class elki.clustering.kmedoids.EagerPAM.Instance
Constructor.
Instance(DistanceQuery<?>, DBIDs, WritableIntegerDataStore) - Constructor for class elki.clustering.kmedoids.FasterPAM.Instance
Constructor.
Instance(DistanceQuery<?>, DBIDs, WritableIntegerDataStore) - Constructor for class elki.clustering.kmedoids.FastPAM1.Instance
Constructor.
Instance(DistanceQuery<?>, DBIDs, WritableIntegerDataStore) - Constructor for class elki.clustering.kmedoids.PAM.Instance
Constructor.
Instance(DistanceQuery<?>, DBIDs, WritableIntegerDataStore) - Constructor for class elki.clustering.kmedoids.ReynoldsPAM.Instance
Constructor.
Instance(DistanceQuery<?>, DBIDs, WritableIntegerDataStore) - Constructor for class elki.clustering.kmedoids.SingleAssignmentKMedoids.Instance
Constructor.
Instance(DistanceQuery<?>, DBIDs, WritableIntegerDataStore) - Constructor for class elki.clustering.silhouette.FasterMSC.Instance
Constructor.
Instance(DistanceQuery<?>, DBIDs, WritableIntegerDataStore) - Constructor for class elki.clustering.silhouette.FastMSC.Instance
Constructor.
Instance(DistanceQuery<?>, DBIDs, WritableIntegerDataStore) - Constructor for class elki.clustering.silhouette.PAMMEDSIL.Instance
Constructor.
Instance(DistanceQuery<?>, DBIDs, WritableIntegerDataStore) - Constructor for class elki.clustering.silhouette.PAMSIL.Instance
Constructor.
Instance(DistanceQuery<?>, DBIDs, WritableIntegerDataStore, double) - Constructor for class elki.clustering.kmedoids.FastPAM.Instance
Constructor.
Instance(Relation<? extends NumberVector>) - Constructor for class elki.clustering.correlation.HiCO.Instance
Constructor.
Instance(Relation<? extends NumberVector>) - Constructor for class elki.clustering.subspace.HiSC.Instance
Constructor.
Instance(Relation<? extends NumberVector>, double[][]) - Constructor for class elki.clustering.kmeans.spherical.EuclideanSphericalElkanKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, double[][]) - Constructor for class elki.clustering.kmeans.spherical.EuclideanSphericalHamerlyKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, double[][]) - Constructor for class elki.clustering.kmeans.spherical.EuclideanSphericalSimplifiedElkanKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, double[][]) - Constructor for class elki.clustering.kmeans.spherical.SphericalElkanKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, double[][]) - Constructor for class elki.clustering.kmeans.spherical.SphericalHamerlyKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, double[][]) - Constructor for class elki.clustering.kmeans.spherical.SphericalKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, double[][]) - Constructor for class elki.clustering.kmeans.spherical.SphericalSimplifiedElkanKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, double[][]) - Constructor for class elki.clustering.kmeans.spherical.SphericalSimplifiedHamerlyKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, double[][]) - Constructor for class elki.clustering.kmeans.spherical.SphericalSingleAssignmentKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, double, RandomFactory) - Constructor for class elki.clustering.kmeans.initialization.SphericalKMeansPlusPlus.Instance
Constructor.
Instance(Relation<? extends NumberVector>, int, double, RandomFactory) - Constructor for class elki.clustering.kmeans.initialization.SphericalAFKMC2.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.AbstractKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.AnnulusKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.CompareMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.ElkanKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.ExponionKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.HamerlyKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.HartiganWongKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.KDTreeFilteringKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.KDTreePruningKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.KMeansMinusMinus.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.KMediansLloyd.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.LloydKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.MacQueenKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.ShallotKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.SimplifiedElkanKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.SingleAssignmentKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][]) - Constructor for class elki.clustering.kmeans.SortMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, double[][], int) - Constructor for class elki.clustering.kmeans.YinYangKMeans.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, int, RandomFactory) - Constructor for class elki.clustering.kmeans.initialization.AFKMC2.Instance
Constructor.
Instance(Relation<? extends NumberVector>, NumberVectorDistance<?>, int, RandomFactory) - Constructor for class elki.clustering.kmeans.initialization.KMC2.Instance
Constructor.
Instance(Relation<O>) - Constructor for class elki.clustering.optics.OPTICSHeap.Instance
Constructor for a single data set.
Instance(Relation<O>) - Constructor for class elki.clustering.optics.OPTICSList.Instance
Constructor for a single data set.
Instance(Relation<V>, NumberVectorDistance<? super V>, WritableIntegerDataStore, double[][]) - Constructor for class elki.clustering.kmeans.parallel.KMeansProcessor.Instance
Constructor.
Instance(Distance<? super V>, double, int, double) - Constructor for class elki.clustering.dbscan.GriDBSCAN.Instance
Constructor.
Instance2(DistanceQuery<?>, DBIDs, WritableIntegerDataStore) - Constructor for class elki.clustering.silhouette.FasterMSC.Instance2
Constructor.
Instance2(DistanceQuery<?>, DBIDs, WritableIntegerDataStore) - Constructor for class elki.clustering.silhouette.FastMSC.Instance2
Constructor.
instantiate(Database) - Method in class elki.clustering.dbscan.predicates.COPACNeighborPredicate
 
instantiate(Database) - Method in interface elki.clustering.dbscan.predicates.CorePredicate
Instantiate for a database.
instantiate(Database) - Method in class elki.clustering.dbscan.predicates.EpsilonNeighborPredicate
 
instantiate(Database) - Method in class elki.clustering.dbscan.predicates.ERiCNeighborPredicate
 
instantiate(Database) - Method in class elki.clustering.dbscan.predicates.FourCCorePredicate
 
instantiate(Database) - Method in class elki.clustering.dbscan.predicates.FourCNeighborPredicate
 
instantiate(Database) - Method in class elki.clustering.dbscan.predicates.MinPtsCorePredicate
 
instantiate(Database) - Method in interface elki.clustering.dbscan.predicates.NeighborPredicate
Instantiate for a database.
instantiate(Database) - Method in class elki.clustering.dbscan.predicates.PreDeConCorePredicate
 
instantiate(Database) - Method in class elki.clustering.dbscan.predicates.PreDeConNeighborPredicate
 
instantiate(Database) - Method in class elki.clustering.dbscan.predicates.SimilarityNeighborPredicate
 
instantiate(Relation<? extends NumberVector>) - Method in class elki.clustering.dbscan.predicates.COPACNeighborPredicate
Full instantiation method.
instantiate(Relation<? extends NumberVector>) - Method in class elki.clustering.dbscan.predicates.ERiCNeighborPredicate
Full instantiation interface.
instantiate(Relation<T>) - Method in class elki.similarity.cluster.ClusteringAdjustedRandIndexSimilarity
 
instantiate(Relation<T>) - Method in class elki.similarity.cluster.ClusteringBCubedF1Similarity
 
instantiate(Relation<T>) - Method in interface elki.similarity.cluster.ClusteringDistanceSimilarity
 
instantiate(Relation<T>) - Method in class elki.similarity.cluster.ClusteringFowlkesMallowsSimilarity
 
instantiate(Relation<T>) - Method in class elki.similarity.cluster.ClusteringRandIndexSimilarity
 
instantiate(Relation<T>) - Method in class elki.similarity.cluster.ClusterIntersectionSimilarity
 
instantiate(Relation<T>) - Method in class elki.similarity.cluster.ClusterJaccardSimilarity
 
instantiate(Executor) - Method in class elki.clustering.dbscan.parallel.ParallelGeneralizedDBSCAN.Instance
 
instantiate(Executor) - Method in class elki.clustering.kmeans.parallel.KMeansProcessor
 
InterclusterWeight - Class in elki.clustering.kmeans.initialization.betula
Initialization via n2 * D2²(cf1, cf2), which supposedly is closes to the idea of k-means++ initialization.
InterclusterWeight() - Constructor for class elki.clustering.kmeans.initialization.betula.InterclusterWeight
 
inverseDensities - Variable in class elki.clustering.optics.FastOPTICS
Inverse Densities correspond to average distances in point set of projections
inversePurity() - Method in class elki.evaluation.clustering.SetMatchingPurity
Get the set matchings inverse purity (second:first clustering) (normalized, 1 = equal)
invertedRows - Variable in class elki.data.model.BiclusterWithInversionsModel
The ids of inverted rows.
invertRow(int, boolean) - Method in class elki.clustering.biclustering.ChengAndChurch.BiclusterCandidate
 
ipiPow - Variable in class elki.clustering.em.KDTreeEM
Gaussian scaling factor for likelihood.
irow - Variable in class elki.clustering.biclustering.ChengAndChurch.BiclusterCandidate
Row and column bitmasks.
isAssigned() - Method in class elki.clustering.subspace.clique.CLIQUEUnit
Returns true if this unit is already assigned to a cluster.
isBetter(double, double) - Method in class elki.clustering.kmeans.quality.AkaikeInformationCriterion
 
isBetter(double, double) - Method in class elki.clustering.kmeans.quality.AkaikeInformationCriterionXMeans
 
isBetter(double, double) - Method in class elki.clustering.kmeans.quality.BayesianInformationCriterion
 
isBetter(double, double) - Method in class elki.clustering.kmeans.quality.BayesianInformationCriterionXMeans
 
isBetter(double, double) - Method in class elki.clustering.kmeans.quality.BayesianInformationCriterionZhao
 
isBetter(double, double) - Method in interface elki.clustering.kmeans.quality.KMeansQualityMeasure
Compare two scores.
isBetter(double, double) - Method in class elki.clustering.kmeans.quality.WithinClusterMeanDistance
 
isBetter(double, double) - Method in class elki.clustering.kmeans.quality.WithinClusterVariance
 
isCorePoint(DBIDRef, PreDeConNeighborPredicate.PreDeConModel) - Method in class elki.clustering.dbscan.predicates.FourCCorePredicate.Instance
 
isCorePoint(DBIDRef, PreDeConNeighborPredicate.PreDeConModel) - Method in class elki.clustering.dbscan.predicates.PreDeConCorePredicate.Instance
 
isCorePoint(DBIDRef, DBIDs) - Method in class elki.clustering.dbscan.predicates.MinPtsCorePredicate.Instance
 
isCorePoint(DBIDRef, T) - Method in interface elki.clustering.dbscan.predicates.CorePredicate.Instance
Decide whether the point is a core point, based on its neighborhood.
isEmpty() - Method in class elki.clustering.dbscan.predicates.COPACNeighborPredicate.COPACModel
 
isFarther(double[], double[], double[], double[]) - Method in class elki.clustering.kmeans.KDTreeFilteringKMeans.Instance
Check if a cluster mean is farther than another.
isLocalMaximum(double, DBIDs, WritableDoubleDataStore) - Method in class elki.clustering.dbscan.LSDBC
Test if a point is a local density maximum.
isMetric() - Method in class elki.similarity.cluster.ClusteringAdjustedRandIndexSimilarity
 
isMetric() - Method in class elki.similarity.cluster.ClusteringBCubedF1Similarity
 
isMetric() - Method in class elki.similarity.cluster.ClusteringFowlkesMallowsSimilarity
 
isMetric() - Method in class elki.similarity.cluster.ClusteringRandIndexSimilarity
 
isMetric() - Method in class elki.similarity.cluster.ClusterIntersectionSimilarity
 
isMetric() - Method in class elki.similarity.cluster.ClusterJaccardSimilarity
 
isNoise() - Method in class elki.data.Cluster
Getter for noise flag.
isNone() - Method in class elki.evaluation.clustering.pairsegments.Segment
Check if this segment contains the pairs that are never clustered by any of the clusterings (all 0).
isNotSpurious(int) - Method in class elki.clustering.hierarchical.extraction.SimplifiedHierarchyExtraction.TempCluster
Test if a cluster is spurious.
isParent(ERiCNeighborPredicate.Instance, Cluster<CorrelationModel>, It<Cluster<CorrelationModel>>) - Method in class elki.clustering.correlation.ERiC
Returns true, if the specified parent cluster is a parent of one child of the children clusters.
isReferenceResult(Clustering<?>) - Method in class elki.evaluation.clustering.EvaluateClustering
Test if a clustering result is a valid reference result.
isSoft() - Method in class elki.clustering.em.BetulaGMM
 
isSpurious(int) - Method in class elki.clustering.hierarchical.extraction.HDBSCANHierarchyExtraction.TempCluster
Test if a cluster is spurious.
isSpurious(HDBSCANHierarchyExtraction.TempCluster, boolean) - Method in class elki.clustering.hierarchical.extraction.HDBSCANHierarchyExtraction.Instance
Spurious, also for non-materialized clusters.
isSquared - Variable in class elki.clustering.hierarchical.ClusterMergeHistory
Flag to indicate squared values
isSquared - Variable in class elki.clustering.hierarchical.ClusterMergeHistoryBuilder
Flag to indicate squared distances.
isSquared - Variable in class elki.clustering.kmeans.AbstractKMeans.Instance
Indicates whether the distance function is squared.
isSquared() - Method in class elki.clustering.hierarchical.ClusterMergeHistory
Indicate whether the stored values are squared values.
isStrictPartitioning() - Method in class elki.evaluation.clustering.ClusterContingencyTable
Check whether the marginal cluster sizes both sum to the total size.
isSubspace(Subspace) - Method in class elki.data.Subspace
Returns true if this subspace is a subspace of the specified subspace, i.e.
isSuperset(P3C.Signature) - Method in class elki.clustering.subspace.P3C.Signature
Test whether this is a superset of the other signature.
isSymmetric() - Method in interface elki.similarity.cluster.ClusteringDistanceSimilarity
 
isSymmetric() - Method in class elki.similarity.cluster.ClusterIntersectionSimilarity
 
isSymmetric() - Method in class elki.similarity.cluster.ClusterJaccardSimilarity
 
isUnpaired() - Method in class elki.evaluation.clustering.pairsegments.Segment
Checks if the segment has a cluster with unpaired objects.
iter - Variable in class elki.clustering.biclustering.AbstractBiclustering
Iterator to use for more efficient random access.
iter - Variable in class elki.clustering.kmeans.KDTreePruningKMeans.Instance
Iterator into the k-d-tree entries.
iter() - Method in class elki.clustering.dbscan.predicates.COPACNeighborPredicate.COPACModel
 
iter() - Method in class elki.clustering.optics.ClusterOrder
Get an iterator.
iterate(int) - Method in class elki.clustering.kmeans.AbstractKMeans.Instance
Main loop function.
iterate(int) - Method in class elki.clustering.kmeans.CompareMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.HamerlyKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.HartiganWongKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.KDTreePruningKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.KMeansMinusMinus.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.KMediansLloyd.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.LloydKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.MacQueenKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.SimplifiedElkanKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.SingleAssignmentKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.spherical.EuclideanSphericalHamerlyKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.spherical.EuclideanSphericalSimplifiedElkanKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.spherical.SphericalHamerlyKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.spherical.SphericalKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.spherical.SphericalSimplifiedElkanKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.spherical.SphericalSimplifiedHamerlyKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.spherical.SphericalSingleAssignmentKMeans.Instance
 
iterate(int) - Method in class elki.clustering.kmeans.YinYangKMeans.Instance
 
iterator() - Method in class elki.clustering.optics.OPTICSXi.SteepAreaResult
 
iterator() - Method in class elki.evaluation.clustering.pairsegments.Segments
 
iterDBIDs(COPACNeighborPredicate.COPACModel) - Method in class elki.clustering.dbscan.predicates.COPACNeighborPredicate.Instance
 
iterDBIDs(PreDeConNeighborPredicate.PreDeConModel) - Method in class elki.clustering.dbscan.predicates.FourCNeighborPredicate.Instance
 
iterDBIDs(PreDeConNeighborPredicate.PreDeConModel) - Method in class elki.clustering.dbscan.predicates.PreDeConNeighborPredicate.Instance
 
iterDBIDs(DBIDs) - Method in class elki.clustering.dbscan.predicates.ERiCNeighborPredicate.Instance
 
iterDBIDs(DoubleDBIDList) - Method in class elki.clustering.dbscan.predicates.EpsilonNeighborPredicate.Instance
 
iterDBIDs(DoubleDBIDList) - Method in class elki.clustering.dbscan.predicates.SimilarityNeighborPredicate.Instance
 
iterDBIDs(T) - Method in interface elki.clustering.dbscan.predicates.NeighborPredicate.Instance
Add the neighbors to a DBID set
iterToplevelClusters() - Method in class elki.data.Clustering
Iterate over the top level clusters.
itran - Variable in class elki.clustering.kmeans.HartiganWongKMeans.Instance
Updated in quick-transfer
ix - Variable in class elki.clustering.hierarchical.HACAM.Instance
Iterators into the object ids.
ix - Variable in class elki.clustering.hierarchical.MedoidLinkage.Instance
Iterators into the object ids.
ix - Variable in class elki.clustering.hierarchical.MiniMax.Instance
Iterators into the object ids.
iy - Variable in class elki.clustering.hierarchical.HACAM.Instance
Iterators into the object ids.
iy - Variable in class elki.clustering.hierarchical.MedoidLinkage.Instance
Iterators into the object ids.
iy - Variable in class elki.clustering.hierarchical.MiniMax.Instance
Iterators into the object ids.
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