Package net.haesleinhuepf.clijx.simpleitk

Class SimpleITKWienerDeconvolution

java.lang.Object

net.haesleinhuepf.clij.macro.AbstractCLIJPlugin

net.haesleinhuepf.clij2.AbstractCLIJ2Plugin

net.haesleinhuepf.clijx.simpleitk.AbstractSimpleITKCLIJ2Plugin

net.haesleinhuepf.clijx.simpleitk.SimpleITKWienerDeconvolution

All Implemented Interfaces:

PlugInFilter, net.haesleinhuepf.clij.macro.CLIJMacroPlugin, net.haesleinhuepf.clij.macro.CLIJOpenCLProcessor, net.haesleinhuepf.clij.macro.documentation.OffersDocumentation, net.haesleinhuepf.clij2.utilities.HasAuthor, net.haesleinhuepf.clij2.utilities.HasClassifiedInputOutput, net.haesleinhuepf.clij2.utilities.HasLicense, net.haesleinhuepf.clij2.utilities.IsCategorized, SciJavaPlugin

public class SimpleITKWienerDeconvolution
extends AbstractSimpleITKCLIJ2Plugin
implements net.haesleinhuepf.clij.macro.CLIJMacroPlugin, net.haesleinhuepf.clij.macro.CLIJOpenCLProcessor, net.haesleinhuepf.clij.macro.documentation.OffersDocumentation, net.haesleinhuepf.clij2.utilities.IsCategorized, net.haesleinhuepf.clij2.utilities.HasClassifiedInputOutput

Field Summary

Fields inherited from class net.haesleinhuepf.clij.macro.AbstractCLIJPlugin

args, clij, default_values, name

Fields inherited from interface ij.plugin.filter.PlugInFilter

CONVERT_TO_FLOAT, DOES_16, DOES_32, DOES_8C, DOES_8G, DOES_ALL, DOES_RGB, DOES_STACKS, DONE, FINAL_PROCESSING, KEEP_THRESHOLD, NO_CHANGES, NO_IMAGE_REQUIRED, NO_UNDO, NO_UNDO_RESET, PARALLELIZE_IMAGES, PARALLELIZE_STACKS, ROI_REQUIRED, SNAPSHOT, STACK_REQUIRED, SUPPORTS_MASKING

Constructor Summary

Constructors

Constructor	Description
SimpleITKWienerDeconvolution()

Method Summary

Modifier and Type	Method	Description
net.haesleinhuepf.clij.clearcl.ClearCLBuffer	createOutputBufferFromSource(net.haesleinhuepf.clij.clearcl.ClearCLBuffer input)
boolean	executeCL()
String	getAvailableForDimensions()
String	getCategories()
Object[]	getDefaultValues()
String	getDescription()
String	getInputType()
String	getOutputType()
String	getParameterHelpText()
static boolean	simpleITKWienerDeconvolution(net.haesleinhuepf.clij2.CLIJ2 clij2, net.haesleinhuepf.clij.clearcl.ClearCLBuffer input, net.haesleinhuepf.clij.clearcl.ClearCLBuffer input_psf, net.haesleinhuepf.clij.clearcl.ClearCLBuffer output, Float noise_variance, Boolean normalize)

Methods inherited from class net.haesleinhuepf.clijx.simpleitk.AbstractSimpleITKCLIJ2Plugin

getAuthorName, getLicense

Methods inherited from class net.haesleinhuepf.clij2.AbstractCLIJ2Plugin

getCLIJ2, setClij, setCLIJ2

Methods inherited from class net.haesleinhuepf.clij.macro.AbstractCLIJPlugin

asBoolean, asFloat, asInteger, containsCLBufferArguments, containsCLImageArguments, getImageVariableName, getName, imageJ2Args, imageJArgs, openCLBufferArgs, openCLImageArgs, releaseBuffers, releaseImages, run, setArgs, setup

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.haesleinhuepf.clij.macro.CLIJMacroPlugin

getName, setArgs, setClij

Methods inherited from interface net.haesleinhuepf.clij2.utilities.IsCategorized

isInCategory

Constructor Detail

SimpleITKWienerDeconvolution

public SimpleITKWienerDeconvolution()

Method Detail

getInputType

public String getInputType()

Specified by:

getInputType in interface net.haesleinhuepf.clij2.utilities.HasClassifiedInputOutput

getOutputType

public String getOutputType()

Specified by:

getOutputType in interface net.haesleinhuepf.clij2.utilities.HasClassifiedInputOutput

getParameterHelpText

public String getParameterHelpText()

Specified by:

getParameterHelpText in interface net.haesleinhuepf.clij.macro.CLIJMacroPlugin

getDefaultValues

public Object[] getDefaultValues()

Overrides:

getDefaultValues in class net.haesleinhuepf.clij.macro.AbstractCLIJPlugin

executeCL

public boolean executeCL()

Specified by:

executeCL in interface net.haesleinhuepf.clij.macro.CLIJOpenCLProcessor

simpleITKWienerDeconvolution

public static boolean simpleITKWienerDeconvolution(net.haesleinhuepf.clij2.CLIJ2 clij2,
                                                   net.haesleinhuepf.clij.clearcl.ClearCLBuffer input,
                                                   net.haesleinhuepf.clij.clearcl.ClearCLBuffer input_psf,
                                                   net.haesleinhuepf.clij.clearcl.ClearCLBuffer output,
                                                   Float noise_variance,
                                                   Boolean normalize)

createOutputBufferFromSource

public net.haesleinhuepf.clij.clearcl.ClearCLBuffer createOutputBufferFromSource(net.haesleinhuepf.clij.clearcl.ClearCLBuffer input)

Specified by:

createOutputBufferFromSource in interface net.haesleinhuepf.clij.macro.CLIJMacroPlugin

Overrides:

createOutputBufferFromSource in class net.haesleinhuepf.clij.macro.AbstractCLIJPlugin

getDescription

public String getDescription()

Specified by:

getDescription in interface net.haesleinhuepf.clij.macro.documentation.OffersDocumentation

getAvailableForDimensions

public String getAvailableForDimensions()

Specified by:

getAvailableForDimensions in interface net.haesleinhuepf.clij.macro.documentation.OffersDocumentation

getCategories

public String getCategories()

Specified by:

getCategories in interface net.haesleinhuepf.clij2.utilities.IsCategorized