net.maizegenetics.analysis.gbs

Class SNPLogging

net.maizegenetics.analysis.gbs.SNPLogging

public class SNPLogging

Constructor Detail

SNPLogging

public SNPLogging(java.lang.String filename,
                  java.lang.Class creator)

Method Detail

close

public void close()

writeEntry

public void writeEntry(GenotypeTable a,
                       int site,
                       java.lang.String tagLocusStart,
                       java.lang.String strand,
                       java.lang.String test,
                       java.lang.String status,
                       java.lang.String value,
                       java.lang.String cuttoff)

writeEntry

public void writeEntry(java.lang.String chr,
                       int position,
                       java.lang.String alleles,
                       java.lang.String tagLocusStart,
                       java.lang.String strand,
                       java.lang.String test,
                       java.lang.String status,
                       java.lang.String value,
                       java.lang.String cuttoff)