net.maizegenetics.stats.linearmodels

Class FactorModelEffect

net.maizegenetics.stats.linearmodels.FactorModelEffect

All Implemented Interfaces:

ModelEffect

public class FactorModelEffect
implements ModelEffect

Constructor Detail

FactorModelEffect

public FactorModelEffect(kotlin.Array[] levels,
                         boolean restricted)

FactorModelEffect

public FactorModelEffect(kotlin.Array[] levels,
                         boolean restricted,
                         java.lang.Object id)

Method Detail

getID

public java.lang.Object getID()

getSize

public int getSize()

getX

public DoubleMatrix getX()

getXtX

public DoubleMatrix getXtX()

getXty

public DoubleMatrix getXty(kotlin.Array[] y)

setID

public void setID(java.lang.Object id)

getXtX2

public DoubleMatrix getXtX2(FactorModelEffect fme)

Parameters:

fme - a FactorModelEffect

Returns:

org.jetbrains.dokka.NodeRenderContent@674c17d: the matrix product of this ModelEffect transposed and fme

getyhat

public DoubleMatrix getyhat(DoubleMatrix beta)

getyhat

public DoubleMatrix getyhat(kotlin.Array[] beta)

getLevels

public kotlin.Array[] getLevels()

Returns:

org.jetbrains.dokka.NodeRenderContent@7087ee54: the level of each observation for this factor

getRestricted

public boolean getRestricted()

setRestricted

public void setRestricted(boolean restricted)

getNumberOfLevels

public int getNumberOfLevels()

getLevelCounts

public kotlin.Array[] getLevelCounts()

getCopy

public ModelEffect getCopy()

getSubSample

public ModelEffect getSubSample(kotlin.Array[] sample)

getEffectSize

public int getEffectSize()