net.maizegenetics.taxa.tree

Interface AttributeNode

All Superinterfaces:

Node

All Known Implementing Classes:

SimpleNode

public AttributeNode
extends Node

interface for a node (includes branch) in a binary/non-binary rooted/unrooted tree. Unlike its superclass this node can have an arbitrary number of named attributes associated with it.

Field Detail

NODE_HEIGHT_SE

java.lang.String NODE_HEIGHT_SE

attribute name for the standard error on a node's height.

CLADE_PROBABILITY

java.lang.String CLADE_PROBABILITY

attribute name for the probability of the clade defined by an internal node.

SUBTREE_PROBABILITY

java.lang.String SUBTREE_PROBABILITY

attribute name for the probability of the subtree defined by an internal node.

MEAN_CLADE_HEIGHT

java.lang.String MEAN_CLADE_HEIGHT

attribute name for the mean height of this clade in a group of trees.

Method Detail

setAttribute

void setAttribute(java.lang.String name,
                  java.lang.Object value)

Sets a named attribute to the given value.

Parameters:

name - the name of the attribute

value - the value to set the attribute

getAttribute

java.lang.Object getAttribute(java.lang.String name)

Parameters:

name - the name of the attribute.

Returns:

org.jetbrains.dokka.NodeRenderContent@7de1a6c1: the attribute with the given name or null if it doesn't exist.

getAttributeNames

java.util.Enumeration getAttributeNames()

Returns:

org.jetbrains.dokka.NodeRenderContent@51d50556: an enumeration of the attributes that this node has.